Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.001G255100.1 |
Family | GH17 |
Protein Properties | Length: 351 Molecular Weight: 37804.3 Isoelectric Point: 4.6594 |
Chromosome | Chromosome/Scaffold: 01 Start: 26479372 End: 26481456 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 40 | 349 | 0 |
IGVCYGKNGNNLPSDQEVVSLFQTNVIGRMRIYDPNRDTLEALRGSNIEVVLGVPNDKLQSLTDASAATTWVQDNVVAYSSNVKFRYIAVGNEVHPGDAN AQSVLPAMQNIHNAIASANLQDQIKVSTAIDTTLLGSSYPPSDGSFSDSASSYINPIINFLRTNGSPLLANVYPYFSYTGNPQSIDLSYALFTSPGVVVQ DGQYGYQNLFDALLDSLYAALEKAGAPDLNIVVSESGWPSEGGTAATADNAGTFYRNLINHVKQGTPRRSGQAIETYLFAMFDENLKAAGIEQHFGLFLP NKQPKYQLTF |
Full Sequence |
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Protein Sequence Length: 351 Download |
MGGYSSRLQS STMNTFMATT ILLLFGLIIS RLTLSDAQSI GVCYGKNGNN LPSDQEVVSL 60 FQTNVIGRMR IYDPNRDTLE ALRGSNIEVV LGVPNDKLQS LTDASAATTW VQDNVVAYSS 120 NVKFRYIAVG NEVHPGDANA QSVLPAMQNI HNAIASANLQ DQIKVSTAID TTLLGSSYPP 180 SDGSFSDSAS SYINPIINFL RTNGSPLLAN VYPYFSYTGN PQSIDLSYAL FTSPGVVVQD 240 GQYGYQNLFD ALLDSLYAAL EKAGAPDLNI VVSESGWPSE GGTAATADNA GTFYRNLINH 300 VKQGTPRRSG QAIETYLFAM FDENLKAAGI EQHFGLFLPN KQPKYQLTFG * 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0006 | 5 | 337 | 358 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 2.0e-143 | 40 | 349 | 312 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAC66186.1 | 0 | 10 | 350 | 6 | 346 | beta-1,3-glucanase [Fragaria x ananassa] |
RefSeq | XP_002299791.1 | 0 | 13 | 350 | 1 | 338 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002314087.1 | 0 | 41 | 350 | 1 | 310 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002336706.1 | 0 | 32 | 349 | 5 | 322 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002513528.1 | 0 | 36 | 350 | 29 | 343 | Lichenase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 40 | 349 | 2 | 315 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
PDB | 3f55_C | 0 | 40 | 349 | 2 | 315 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
PDB | 3f55_B | 0 | 40 | 349 | 2 | 315 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
PDB | 3f55_A | 0 | 40 | 349 | 2 | 315 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
PDB | 3em5_D | 0 | 40 | 349 | 2 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |