| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.001G299000.8 |
| Family | GH95 |
| Protein Properties | Length: 459 Molecular Weight: 51855.7 Isoelectric Point: 6.4487 |
| Chromosome | Chromosome/Scaffold: 01 Start: 30317738 End: 30323513 |
| Description | 1,2-alpha-L-fucosidases |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH95 | 5 | 409 | 0 |
| SYVKGENQIIIEGSCPGNRYAQKLNENDSPQGIQFTAILDLQVSEARGLVRVSEDSKLRVEGSDWAVLLLVSSSSFDGPFTKPIDSKKNPTSDSLSVLKS IGNLSYVDLYAHHLDDYQSLFHRVSLQLSKSSKNVSGNASLTRKEHMPFKSDISLNGSEDDTVSTAERVKAFQTDEDPSLVELLFQYGRYLLISCSRPGT QVANLQGIWNKDLTPPWDGAQHLNINLQMNYWPSLSCNLKECQEPLFEYISSLSISGSRTAKVNYEAKGWVAHQVSDLWAKTSPDAGQALWALWPMGGAW LCTHLWEHYTYAKDKDFLRDKAYPLLEGCTSFLLDWLIEGPGGYLETNPSTSPEHMFIAPDGKPASVSYSSTMDMSIIKEVFSAIVSAAKFITNRFWEEM RMNWF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 459 Download |
| MSHHSYVKGE NQIIIEGSCP GNRYAQKLNE NDSPQGIQFT AILDLQVSEA RGLVRVSEDS 60 KLRVEGSDWA VLLLVSSSSF DGPFTKPIDS KKNPTSDSLS VLKSIGNLSY VDLYAHHLDD 120 YQSLFHRVSL QLSKSSKNVS GNASLTRKEH MPFKSDISLN GSEDDTVSTA ERVKAFQTDE 180 DPSLVELLFQ YGRYLLISCS RPGTQVANLQ GIWNKDLTPP WDGAQHLNIN LQMNYWPSLS 240 CNLKECQEPL FEYISSLSIS GSRTAKVNYE AKGWVAHQVS DLWAKTSPDA GQALWALWPM 300 GGAWLCTHLW EHYTYAKDKD FLRDKAYPLL EGCTSFLLDW LIEGPGGYLE TNPSTSPEHM 360 FIAPDGKPAS VSYSSTMDMS IIKEVFSAIV SAAKFITNRF WEEMRMNWFK KFLKLFLGFY 420 QQKLLETVPL WSGHRIFRTQ RFTIDMYHTS LAFFQGIQ* |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002270199.1 | 0 | 12 | 396 | 214 | 597 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002298754.1 | 0 | 1 | 396 | 180 | 559 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002313154.1 | 0 | 1 | 396 | 181 | 554 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002527475.1 | 0 | 1 | 396 | 193 | 588 | conserved hypothetical protein [Ricinus communis] |
| RefSeq | XP_002527476.1 | 0 | 1 | 399 | 205 | 603 | conserved hypothetical protein [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2rdy_B | 0 | 32 | 435 | 207 | 568 | A Chain A, Crystal Structure Of A Putative Glycoside Hydrolase Family Protein From Bacillus Halodurans |
| PDB | 2rdy_A | 0 | 32 | 435 | 207 | 568 | A Chain A, Crystal Structure Of A Putative Glycoside Hydrolase Family Protein From Bacillus Halodurans |
| PDB | 2eae_A | 3e-33 | 35 | 394 | 237 | 594 | A Chain A, Crystal Structure Of 1,2-A-L-Fucosidase From Bifidobacterium Bifidum In Complexes With Products |
| PDB | 2eac_B | 4e-33 | 35 | 394 | 238 | 595 | A Chain A, Crystal Structure Of 1,2-A-L-Fucosidase From Bifidobacterium Bifidum In Complexes With Products |
| PDB | 2eac_A | 4e-33 | 35 | 394 | 238 | 595 | A Chain A, Crystal Structure Of 1,2-A-L-Fucosidase From Bifidobacterium Bifidum In Complexes With Products |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| DT558493 | 285 | 122 | 406 | 0 |
| GT626952 | 275 | 91 | 365 | 0 |
| DV709909 | 282 | 113 | 393 | 0 |
| ES839492 | 224 | 176 | 399 | 0 |
| ES839492 | 66 | 391 | 456 | 0.028 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
