| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.001G300800.2 |
| Family | CE6 |
| Protein Properties | Length: 259 Molecular Weight: 28988.3 Isoelectric Point: 6.5678 |
| Chromosome | Chromosome/Scaffold: 01 Start: 30485297 End: 30486474 |
| Description | Domain of unknown function (DUF303) |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE6 | 81 | 174 | 5.5e-31 |
| GPGMSFANMVREKMRVVVGLVPCAVGGTAITRWGRGEVLYENMVKRAKESVEDGGEIKGLLWYQGESDTSDIHDAEVYQGNMEKLIENVREDLG | |||
| Full Sequence |
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| Protein Sequence Length: 259 Download |
| MEEIPKTSKQ IFILSGQSNM AGRGGVCKDH HHHNHQYWDK LVPPECQPHQ DIFRFSAKLH 60 WEQAHEPLHA DIDSKKVCGV GPGMSFANMV REKMRVVVGL VPCAVGGTAI TRWGRGEVLY 120 ENMVKRAKES VEDGGEIKGL LWYQGESDTS DIHDAEVYQG NMEKLIENVR EDLGLPSLPI 180 VMVAITSGDG KYVDKVREAQ LRINLPNVVC VDAMGLDLKD DHLHLTTEAQ VKLGHMLSEV 240 YLKNFAPSWK RFFSCLLC* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03629 | DUF303 | 8.0e-42 | 10 | 244 | 279 | + Domain of unknown function (DUF303). Distribution of this domain seems limited to prokaryotes and viruses. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM65927.1 | 0 | 5 | 245 | 18 | 259 | unknown [Arabidopsis thaliana] |
| RefSeq | NP_567960.1 | 0 | 5 | 245 | 18 | 259 | hydrolase [Arabidopsis thaliana] |
| RefSeq | XP_002282529.1 | 0 | 6 | 247 | 765 | 999 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002300236.1 | 0 | 9 | 243 | 1 | 235 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518686.1 | 0 | 1 | 246 | 1 | 255 | conserved hypothetical protein [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2apj_D | 0 | 5 | 245 | 18 | 259 | A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At4g34215 At 1.6 Angstrom Resolution |
| PDB | 2apj_C | 0 | 5 | 245 | 18 | 259 | A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At4g34215 At 1.6 Angstrom Resolution |
| PDB | 2apj_B | 0 | 5 | 245 | 18 | 259 | A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At4g34215 At 1.6 Angstrom Resolution |
| PDB | 2apj_A | 0 | 5 | 245 | 18 | 259 | A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At4g34215 At 1.6 Angstrom Resolution |
| PDB | 1zmb_F | 6e-22 | 12 | 242 | 5 | 225 | A Chain A, Crystal Structure Of The Putative Acetylxylan Esterase From Clostridium Acetobutylicum, Northeast Structural Genomics Target Car6 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HS258465 | 242 | 9 | 246 | 0 |
| HS013243 | 242 | 9 | 246 | 0 |
| FQ444680 | 242 | 6 | 247 | 0 |
| FQ439086 | 263 | 6 | 257 | 0 |
| FQ435890 | 242 | 6 | 247 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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