CAZyme Information

Basic Information
SpeciesPopulus trichocarpa
Cazyme IDPotri.001G350400.2
FamilyGH38
Protein PropertiesLength: 856 Molecular Weight: 97697.9 Isoelectric Point: 7.6484
ChromosomeChromosome/Scaffold: 01 Start: 35703709 End: 35708847
Descriptiongolgi alpha-mannosidase II
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH381645030
  KVFVVPHSHNDPGWKLTVEEYYDMQSRHILDTIVHTLSKDPRRKFIWEEMSYLERWWRDASVEKRESFTNLVKAGQLEIVGGGWVMNDEANSHYFAIIEQ
  ITEGNMWLKDTIGVVPKNSWAIDPFGYSPTMAYLLRRMGFENMLIQRTHYELKKELALQKNLEYTWRQSWDVEESTDIFTHMMPFYSYDIPHTCGPEPAI
  CCEFDFARMHGFNYELCPWGKHPVEISQENVQERALKLLDQYRKKSTLYRTNTLLIPLGDDFRYISIDEAEAQFRNYQMLFDYINSNPSLNAEAKFGTLD
  DYFRTLREEADRINYSLPGEVGSGQIGGFPSLSGDFFTYA
Full Sequence
Protein Sequence     Length: 856     Download
MPFSSYIGGN ARRGNVWPSS LLPTISPTPT RSKHPSRKSR KRTALINFIF TNFFTIALSI    60
SLCFLLITIL LFGIPKPLLS SPFKSKPPSY YRVRNRKPPQ NDNSNGNSSN NFNGKEDGAG    120
GATVDITTKG LYDRIQFLDE DGGPWKQGWR VSYKGDEWNS EKLKVFVVPH SHNDPGWKLT    180
VEEYYDMQSR HILDTIVHTL SKDPRRKFIW EEMSYLERWW RDASVEKRES FTNLVKAGQL    240
EIVGGGWVMN DEANSHYFAI IEQITEGNMW LKDTIGVVPK NSWAIDPFGY SPTMAYLLRR    300
MGFENMLIQR THYELKKELA LQKNLEYTWR QSWDVEESTD IFTHMMPFYS YDIPHTCGPE    360
PAICCEFDFA RMHGFNYELC PWGKHPVEIS QENVQERALK LLDQYRKKST LYRTNTLLIP    420
LGDDFRYISI DEAEAQFRNY QMLFDYINSN PSLNAEAKFG TLDDYFRTLR EEADRINYSL    480
PGEVGSGQIG GFPSLSGDFF TYADRQQDYW SGYYISRPFF KAVDRVLEQT LRAAEIMMAL    540
LHGYCQRAQC EKLATGFAYK MTAARRNLAL FQHHDGVTGT AKDHVVQDYG IRMHTSLQDL    600
QIFMSKSIEV LLGIHHEKSD HSPSQFESEQ VRSKYDVQPV LKAINAREGT SQSVVLFNPL    660
EQTREEVVMV IVKRPDVTVL DSNWTCVPSQ VSPELQHDKS KIFTGRHRLH WKASVPAMGL    720
QTYYVANGFE GCEKAKPAKL KYFSMSNSFS CPAPYACSKI EEGVAEIQNQ HQTLTFDVKH    780
GLLQKVTNTD GSMNAVGEEI GMYSSRGSGA YLFKPNGHAQ PIIEAGGHMV IFEGNCLSRK    840
NTMLSFLAKI LMTGN* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd00451GH38N_AMII_euk9.0e-109163449288+
cd11667GH38N_Man2A21.0e-157163514352+
cd11666GH38N_Man2A11.0e-161163514355+
PLN02701PLN027010124834712+
cd10809GH38N_AMII_GMII_SfManIII_like0162514353+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004559alpha-mannosidase activity
GO:0005975carbohydrate metabolic process
GO:0006013mannose metabolic process
GO:0008270zinc ion binding
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
EMBLCBI35021.1018341809unnamed protein product [Vitis vinifera]
RefSeqNP_196999.1018341826GMII (GOLGI ALPHA-MANNOSIDASE II); alpha-mannosidase [Arabidopsis thaliana]
RefSeqXP_002276468.1018341809PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002323809.101186921575predicted protein [Populus trichocarpa]
RefSeqXP_002517418.1018371842mannosidase alpha class 2a, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB1hxk_A012485411741A Chain A, Golgi Alpha-Mannosidase Ii In Complex With Deoxymannojirimicin
PDB1hww_A012485411741A Chain A, Golgi Alpha-Mannosidase Ii In Complex With Deoxymannojirimicin
PDB1hty_A012485411741A Chain A, Golgi Alpha-Mannosidase Ii
PDB3eju_A012485441771A Chain A, Golgi Alpha-Mannosidase Ii
PDB3ejt_A012485441771A Chain A, Golgi Alpha-Mannosidase Ii
Transmembrane Domains
StartEnd
4870
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
HO7891222731684400
DY9390752994387360
FL7143862732505220
FN7613372502715200
CB6620862812945740
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_002_00345.1.265.483Aquca_002_00345.1.265.483Aquca_006_00230.1Aquca_006_00257.5Aquca_006_00257.9
Aquca_006_00257.8Aquca_006_00257.7Aquca_006_00257.6Aquca_006_00257.4Aquca_006_00257.3
Aquca_006_00257.2Aquca_006_00257.1Aquca_043_00016.7Aquca_043_00016.8Aquca_043_00016.6
Aquca_043_00016.5Aquca_043_00016.4Aquca_043_00016.3Aquca_043_00016.2Aquca_043_00016.1
Aquca_043_00019.2Aquca_043_00019.1Aquca_043_00018.1Aquca_056_00071.1Aquca_002_00345.1.162.261
Aquca_002_00345.1.162.261
Arabidopsis lyrata488339488225497001484445
Arabidopsis thalianaAT5G14950.1AT5G66150.1AT5G13980.3AT5G13980.2AT5G13980.1
AT3G26720.2AT3G26720.1
Brachypodium distachyonBradi1g44550.1Bradi3g21117.1Bradi4g17327.1Bradi4g17317.1
Brassica rapaBra023496Bra006275Bra037183Bra006227Bra025225
Carica papayaevm.model.supercontig_6.275evm.model.supercontig_70.70evm.model.supercontig_2646.1evm.TU.contig_36966.1evm.model.supercontig_70.69
Capsella rubellaCarubv10000075mCarubv10002909mCarubv10027738mCarubv10016625m
Citrus clementinaCiclev10014083mCiclev10017635mCiclev10024829mCiclev10024800mCiclev10030627m
Ciclev10014156mCiclev10014160mCiclev10014123m
Citrus sinensisorange1.1g002547morange1.1g002518morange1.1g002134morange1.1g001061morange1.1g015028m
orange1.1g002366morange1.1g004057morange1.1g001910morange1.1g001850morange1.1g002764m
orange1.1g002170morange1.1g002162morange1.1g002383morange1.1g001963morange1.1g001813m
orange1.1g002938morange1.1g002542morange1.1g002064morange1.1g002056morange1.1g002046m
orange1.1g002036m
Cucumis sativusCucsa.339310.1Cucsa.043720.1Cucsa.188400.2Cucsa.188400.1
Eucalyptus grandisEucgr.J02166.1Eucgr.L01536.1Eucgr.J02456.1Eucgr.K02195.1Eucgr.J02455.3
Eucgr.J02455.2Eucgr.J02455.1Eucgr.I01600.1Eucgr.G01931.1Eucgr.J02460.1
Eucgr.J02454.1Eucgr.L01537.1Eucgr.J02457.1Eucgr.J02459.2Eucgr.J02459.1
Fragaria vescamrna28330.1-v1.0-hybridmrna14585.1-v1.0-hybridmrna01394.1-v1.0-hybrid.37.348mrna01394.1-v1.0-hybrid.37.348mrna06416.1-v1.0-hybrid.39.351
mrna06416.1-v1.0-hybrid.39.351mrna14589.1-v1.0-hybrid.71.344
Glycine maxGlyma13g04761.3Glyma13g04761.2Glyma19g01890.1Glyma13g04761.1Glyma02g05240.2
Glyma02g05240.1Glyma16g23600.1Glyma01g36980.1Glyma06g17270.1Glyma04g37790.1
Glyma19g27660.2Glyma19g27660.1Glyma16g05240.2Glyma16g05240.1
Gossypium raimondiiGorai.001G258600.2Gorai.001G258600.1Gorai.006G027500.1Gorai.003G008600.2Gorai.003G008600.1
Gorai.006G000300.3Gorai.006G000300.2Gorai.006G000300.1Gorai.012G082700.6Gorai.012G082700.9
Gorai.012G082700.8Gorai.012G082700.7Gorai.012G082700.5Gorai.012G082700.4Gorai.012G082700.3
Gorai.012G082700.2Gorai.012G082700.10Gorai.012G082700.1Gorai.003G116600.2Gorai.003G116600.1
Linum usitatissimumLus10014507Lus10015337.248.571Lus10015337.248.571Lus10032179Lus10039457
Lus10012578Lus10035111Lus10012577Lus10036074Lus10025960
Lus10014259Lus10041516Lus10015337.158.248Lus10015337.158.248
Malus domesticaMDP0000888429MDP0000267909MDP0000250936MDP0000139458MDP0000274501
MDP0000274500MDP0000409920MDP0000163211MDP0000657082MDP0000211018
Manihot esculentacassava4.1_000571mcassava4.1_001602mcassava4.1_000993mcassava4.1_000971mcassava4.1_000869m
cassava4.1_001123mcassava4.1_001106m
Medicago truncatulaMedtr4g071680.1Medtr6g008850.1Medtr8g075330.1Medtr7g084040.1Medtr3g098650.2
Medtr3g098650.1Medtr7g084030.1
Mimulus guttatusmgv1a000435mmgv1a000658mmgv1a000852mmgv1a000690m
Oryza sativaLOC_Os06g13650.2LOC_Os06g13650.1LOC_Os06g13650.3LOC_Os11g32260.2LOC_Os11g32260.1
LOC_Os10g05069.2LOC_Os10g05069.1LOC_Os10g05069.3
Panicum virgatumPavirv00027286mPavirv00014532mPavirv00024149mPavirv00025946mPavirv00065120m
Physcomitrella patensPp1s10_34V6.1Pp1s77_136V6.1Pp1s129_147V6.1
Phaseolus vulgarisPhvul.004G022500.1Phvul.003G264400.1Phvul.001G084400.1Phvul.002G107300.1Phvul.001G084700.1
Phvul.009G161600.1
Picea abiesMA_10434251g0010MA_879613g0010MA_4107059g0010
Populus trichocarpaPotri.017G073900.2Potri.017G073900.1Potri.001G350400.1Potri.014G143600.1Potri.014G143600.2
Potri.007G056300.1Potri.002G238200.2Potri.002G238200.1Potri.012G106500.2Potri.012G106500.1
Prunus persicappa000458mppa021513mppa000707mppa000755mppa000717m
Ricinus communis29822.m00342029868.m00034130131.m00698230131.m00698130147.m014412
Setaria italicaSi005719mSi038673mSi025964mSi034056mSi025881m
Selaginella moellendorffii104910154366266756410022178241
Sorghum bicolorSb10g008770.1Sb01g026405.1Sb05g019600.1Sb01g026390.1
Thellungiella halophilaThhalv10012487mThhalv10012612mThhalv10012546mThhalv10003575mThhalv10003577m
Vitis viniferaGSVIVT01032586001GSVIVT01018752001GSVIVT01032988001GSVIVT01008340001GSVIVT01008642001
GSVIVT01032989001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)