Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.001G354200.1 |
Family | GH3 |
Protein Properties | Length: 438 Molecular Weight: 48532.3 Isoelectric Point: 5.5865 |
Chromosome | Chromosome/Scaffold: 01 Start: 36194375 End: 36196450 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 101 | 338 | 0 |
GVPRIGLPHYEWWSEALHGVSNVGPATFFNELIPGATSFPTVIHTTASFNKSLWKTIGQAVSAEARAMYNLGRAGLTYWSPNINVVRDPRWGRITETPGE DPFVVGTYASNYVRGLQDVEGAGETKDLNSRPLKVSTCCKHYTAYDVDAWLGIDRYHYDARISMLETFQVPFEMCVKDATCADPRLLKDTIRGEWDLHGY IVSDCDSIQVMVDNHKWLGDTKEDVVAQVLTKGLDLDC |
Full Sequence |
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Protein Sequence Length: 438 Download |
MVKAILLLVL AFLAVCTARD VPLLSMLNHH RSLLSTTPSL ADVPINYTHV CDPTRFANQG 60 MEMKEFGYCD SSLSFEERAK DLVDRMTLDE KVQQLGNKAI GVPRIGLPHY EWWSEALHGV 120 SNVGPATFFN ELIPGATSFP TVIHTTASFN KSLWKTIGQA VSAEARAMYN LGRAGLTYWS 180 PNINVVRDPR WGRITETPGE DPFVVGTYAS NYVRGLQDVE GAGETKDLNS RPLKVSTCCK 240 HYTAYDVDAW LGIDRYHYDA RISMLETFQV PFEMCVKDAT CADPRLLKDT IRGEWDLHGY 300 IVSDCDSIQV MVDNHKWLGD TKEDVVAQVL TKGLDLDCGA YYPDSLQNAV MQGEVAETEI 360 DKSLKYLYVV LMRLGFFDGS PSFKSLGKDH FKNIAVIGPH SNSTAAMVGN YAGVPCRYVT 420 PLDGISSFGE VIRDVLK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 0.0003 | 392 | 426 | 37 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 7.0e-19 | 81 | 425 | 430 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 7.0e-30 | 97 | 404 | 355 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 1.0e-41 | 87 | 363 | 327 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PLN03080 | PLN03080 | 2.0e-125 | 33 | 428 | 453 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI25988.1 | 0 | 4 | 435 | 11 | 485 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002274591.1 | 0 | 41 | 431 | 39 | 480 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002274619.1 | 0 | 4 | 435 | 11 | 485 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002274651.1 | 0 | 10 | 431 | 17 | 484 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002519718.1 | 0 | 17 | 435 | 23 | 486 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 4i3g_B | 2e-18 | 72 | 427 | 47 | 428 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
PDB | 4i3g_A | 2e-18 | 72 | 427 | 47 | 428 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
PDB | 3rrx_A | 9e-17 | 99 | 380 | 100 | 367 | A Chain A, Crystal Structure Of Q683a Mutant Of Exo-1,31,4-Beta-Glucanase (Exop) From Pseudoalteromonas Sp. Bb1 |
PDB | 3ut0_D | 9e-17 | 99 | 380 | 100 | 367 | A Chain A, Crystal Structure Of Q683a Mutant Of Exo-1,31,4-Beta-Glucanase (Exop) From Pseudoalteromonas Sp. Bb1 |
PDB | 3ut0_C | 9e-17 | 99 | 380 | 100 | 367 | A Chain A, Crystal Structure Of Q683a Mutant Of Exo-1,31,4-Beta-Glucanase (Exop) From Pseudoalteromonas Sp. Bb1 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |