Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.001G356000.1 |
Family | GH9 |
Protein Properties | Length: 518 Molecular Weight: 58879.4 Isoelectric Point: 7.5194 |
Chromosome | Chromosome/Scaffold: 01 Start: 36395005 End: 36401184 |
Description | glycosyl hydrolase 9B8 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 37 | 496 | 0 |
NYGEALSKSLLYFESQRSGRLPYNQRVVWRYHSGLADGLEQGVDLVGGYYDAGDNVKFGLPMAFTITMLSWSVIEYSEQISGAGEYEHALEAIKWGTDYF IKAHTHPHVLWAEVGDGDTDHYCWQRPEDMTTSRQAYKVDENNPGSDMAGETAAAMAAASIVFRKTNPHYSHLLLHHAEQLFEFGDKYRGKYDESVKVAK GHYTSVSGYMDELLWAGLWLYKATGDEGYLNYVIENAHIIGKTTKFGVNAFDNLNFFILSVQLLAGKSHRKHQHILKEYRSRAEYYLCACLNKNNVTNVQ RTPGGLLYIRQWNNMQYVSTAAFLLTTYSDHLQASNQRLQCDQGTLDPSDIFKFAKSQVDYILGYNPLGMSYLVGYGAKYPERVHHRGASIESYKGQKDF IGCMQGYDIGYSRQGPNPNVLTGALVGGPDMKDQFRDERENYMQTEACTYNTATLVGVFA |
Full Sequence |
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Protein Sequence Length: 518 Download |
MEKANKQHKV LRHLKFTRLC AWLLSFFAIF PLRQSFNYGE ALSKSLLYFE SQRSGRLPYN 60 QRVVWRYHSG LADGLEQGVD LVGGYYDAGD NVKFGLPMAF TITMLSWSVI EYSEQISGAG 120 EYEHALEAIK WGTDYFIKAH THPHVLWAEV GDGDTDHYCW QRPEDMTTSR QAYKVDENNP 180 GSDMAGETAA AMAAASIVFR KTNPHYSHLL LHHAEQLFEF GDKYRGKYDE SVKVAKGHYT 240 SVSGYMDELL WAGLWLYKAT GDEGYLNYVI ENAHIIGKTT KFGVNAFDNL NFFILSVQLL 300 AGKSHRKHQH ILKEYRSRAE YYLCACLNKN NVTNVQRTPG GLLYIRQWNN MQYVSTAAFL 360 LTTYSDHLQA SNQRLQCDQG TLDPSDIFKF AKSQVDYILG YNPLGMSYLV GYGAKYPERV 420 HHRGASIESY KGQKDFIGCM QGYDIGYSRQ GPNPNVLTGA LVGGPDMKDQ FRDERENYMQ 480 TEACTYNTAT LVGVFAKLHW LEKDYLSANP SLLATRR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02420 | PLN02420 | 0 | 1 | 515 | 535 | + endoglucanase | ||
PLN02171 | PLN02171 | 0 | 15 | 498 | 494 | + endoglucanase | ||
PLN02340 | PLN02340 | 0 | 34 | 502 | 474 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 0 | 37 | 496 | 463 | + Glycosyl hydrolase family 9. | ||
PLN00119 | PLN00119 | 0 | 20 | 498 | 488 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN81074.1 | 0 | 6 | 515 | 2 | 546 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_180858.1 | 0 | 36 | 497 | 38 | 503 | AtGH9B8 (Arabidopsis thaliana glycosyl hydrolase 9B8); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
RefSeq | XP_002300328.1 | 0 | 1 | 517 | 1 | 517 | glycosyl hydrolase family 9 [Populus trichocarpa] |
RefSeq | XP_002321149.1 | 0 | 22 | 515 | 24 | 525 | glycosyl hydrolase family 9 [Populus trichocarpa] |
RefSeq | XP_002529469.1 | 0 | 30 | 515 | 21 | 509 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 35 | 498 | 2 | 428 | A Chain A, Crystal Structure Of The Cellulase Cel9m Of C. Cellulolyticum |
PDB | 1ksc_A | 0 | 35 | 498 | 2 | 428 | A Chain A, Crystal Structure Of The Cellulase Cel9m Of C. Cellulolyticum |
PDB | 1ks8_A | 0 | 35 | 498 | 2 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 2xfg_A | 0 | 31 | 499 | 19 | 460 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 4tf4_B | 0 | 35 | 498 | 3 | 440 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY287831 | 368 | 29 | 392 | 0 |
DY274365 | 413 | 3 | 404 | 0 |
FC912705 | 314 | 29 | 340 | 0 |
HO783495 | 379 | 40 | 414 | 0 |
DY298364 | 339 | 2 | 331 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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