Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.001G384700.1 |
Family | CBM57 |
Protein Properties | Length: 706 Molecular Weight: 77016.3 Isoelectric Point: 8.3854 |
Chromosome | Chromosome/Scaffold: 01 Start: 40005949 End: 40012478 |
Description | Leucine-rich repeat transmembrane protein kinase |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM57 | 315 | 473 | 1.2e-29 |
HINCGGKEAIIEGNIYEDDTDPAGSSRFYQSGTNWAVSTTGHFMDNDRSSDSYTLTNANTSALYMDARLSPISLTYYGFCMGSGSYTVTLHFAEIMFTDD KTYSSLGRRFFDIYIQGKLVQRDFSIQKEAGGVGKAIIKNFTAIVTGNALEIRFYWAGK |
Full Sequence |
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Protein Sequence Length: 706 Download |
HRVLKAQNLG GSLPSDLGRF PYLQEIDLSR NYLNGTIPAE WGATPLATIS IIGNRLTGPI 60 PKEIGNISTL ANFTVEFNQL SGVLPPELGN LTRLEKMHLS SNYFTGQLPA TFEKLTTLKD 120 FRIGDNNFTG QIPNLIQKWT NLEKLVIQGS GLSGPIPLGI ALLEKMADLR ISDLQGNGTE 180 DPFPPLTNMK NLNTLILRSC NIIGPLPVFV GELPISKTLD LSFNKLIGEI PSSFSGLRKA 240 DYIYLTGNQL NGTVPDWIFK DGESVDLSYN NFRNESSCLQ SNVNLFGSAS MGNVSGSTGP 300 CLRSFPCPKQ FYSLHINCGG KEAIIEGNIY EDDTDPAGSS RFYQSGTNWA VSTTGHFMDN 360 DRSSDSYTLT NANTSALYMD ARLSPISLTY YGFCMGSGSY TVTLHFAEIM FTDDKTYSSL 420 GRRFFDIYIQ GKLVQRDFSI QKEAGGVGKA IIKNFTAIVT GNALEIRFYW AGKGTTGLPV 480 RGVYGPLISA ISVTPDFVPP SENGSSNGIS AGTVIGIVAA VVVVIFLILG ILWWKGCLGQ 540 KISMRHDLKG LELKTGSFTL RQIKAATNNF DPANKIGEGG FGPVYKGLLS DGTIIAVKQL 600 SSKSKQGNRE FVNEIGMISA LQHPHLVKLH GCCIEGNQLL LVYEYMENNS LARALFGKFK 660 EHNLIDFKLL ALRCFHTCKG MHACKGRDKI LSLYFASLLI LSQRS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00113 | PLN00113 | 2.0e-25 | 4 | 255 | 278 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
PLN00113 | PLN00113 | 5.0e-30 | 4 | 272 | 299 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
PLN00113 | PLN00113 | 3.0e-32 | 4 | 301 | 331 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
PLN00113 | PLN00113 | 6.0e-35 | 4 | 256 | 255 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
pfam11721 | Malectin | 8.0e-59 | 312 | 491 | 184 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. |
Gene Ontology | |
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GO Term | Description |
GO:0004672 | protein kinase activity |
GO:0005515 | protein binding |
GO:0005524 | ATP binding |
GO:0006468 | protein phosphorylation |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI20121.1 | 0 | 3 | 681 | 90 | 772 | unnamed protein product [Vitis vinifera] |
EMBL | CBI20124.1 | 0 | 3 | 681 | 119 | 801 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002283596.1 | 0 | 1 | 681 | 117 | 801 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002524511.1 | 0 | 3 | 681 | 90 | 747 | ATP binding protein, putative [Ricinus communis] |
RefSeq | XP_002524514.1 | 0 | 3 | 681 | 90 | 770 | ATP binding protein, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ulz_A | 6e-20 | 558 | 655 | 20 | 118 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 3uim_A | 6e-20 | 558 | 655 | 20 | 118 | A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation |
PDB | 3tl8_H | 8e-20 | 558 | 655 | 28 | 126 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3tl8_G | 8e-20 | 558 | 655 | 28 | 126 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3tl8_D | 8e-20 | 558 | 655 | 28 | 126 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |