CAZyme Information

Basic Information
SpeciesPopulus trichocarpa
Cazyme IDPotri.001G385300.1
FamilyCBM57
Protein PropertiesLength: 1022 Molecular Weight: 112278 Isoelectric Point: 6.2602
ChromosomeChromosome/Scaffold: 01 Start: 40046554 End: 40056670
DescriptionLeucine-rich repeat transmembrane protein kinase
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
CBM574245915.7e-24
  INCGGGSGPFNDDTYEGDLTDGGPVAFSFLPGKWGYSSTGTYMENNSVQTSIAKNDFNLGVTGVYETARLAPQSLKYYALCLPKGKYKVQLHFAEIMYSN
  DQTYRSLGRRIFDISIQGITLRKNFNIMEKAGGVGIGIIEVFDNIIVNGGTLEIHLYWAGKGTTFVPN
Full Sequence
Protein Sequence     Length: 1022     Download
MALWPSLLSK TLSVLVSGFV VLNCFAVDKF GSHAQVVAPL LPQDEVQTLQ NISNKLNISN    60
WATINRTSCG SAQWNQTIDS KTESIVTCNC TFENGSVCHV TSISVKGFNL NGVLPEELGD    120
LPHLLEIDLA RNYISGTIPP RLAQLPNLKI LSLIVNRLTG PIPLEIGNIT TMEELVLDDN    180
LLGGSLPPEL GNLTSLKRLV LSSNNFTGSI PETLGNLKNL TEFMIDGSEL SGKIPEFIGN    240
WINIEKLDLQ GTSMEGPIPS SISLLTSLKS LRISDLNGSS STFPNLQAMK NLENLILRNC    300
LITDSIPDYI VNMSSLNILD LSFNKLTGRI SNFTNLESRT VFLNNNLLTG EVPNWALNNR    360
KQVDLSYNNF TWSALEGSAL GGCQQLKQNL NLVSSHLSNN NTDEWCFTKG LPCTQNPEYR    420
SLFINCGGGS GPFNDDTYEG DLTDGGPVAF SFLPGKWGYS STGTYMENNS VQTSIAKNDF    480
NLGVTGVYET ARLAPQSLKY YALCLPKGKY KVQLHFAEIM YSNDQTYRSL GRRIFDISIQ    540
GITLRKNFNI MEKAGGVGIG IIEVFDNIIV NGGTLEIHLY WAGKGTTFVP NRGVHGPLVS    600
AITVTPKFKN GSGLSVGAVI GIVAASCVLA ALFLLLLRSK GYLGGKELVD KELRGLDLQT    660
GYFTLRQIKH ATNNFDTANK IGEGGFGPVY KGVLSDGAVI AVKQLSSKSR QGNREFVNEI    720
GMISALQHPH LVKLYGCCIE GNQLLLVYEY LENNSLARAL FGREEHQLQL DWQTRRKILL    780
GIAKGLSYLH EESRLKIVHR DIKATNVLLD KDLNAKISDF GLAKLDEEEN THISTRIAGT    840
IGYMAPEYAM RGYLTDKADV YSFGVVALEI VSGKSNTNYR PKEEFVYLLD WAYVLHERNN    900
LLELVDPRLG SSYSKEEAMK MLNLALLCTN LSPSLRPAMS SVVRMLEGKI PVQAPIINRG    960
SMDQEARFKA FELLSQDSVS TLSQSSQVQS RSISRDGPWV DSSYSLQSND ETKDLYPINA    1020
D* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
smart00220S_TKc5.0e-48675875203+
smart00221STYKc5.0e-50680946278+
smart00219TyrKc8.0e-51680946278+
cd00180PKc7.0e-51681906232+
cd00192PTKc4.0e-51679947284+
Gene Ontology
GO TermDescription
GO:0004672protein kinase activity
GO:0005515protein binding
GO:0005524ATP binding
GO:0006468protein phosphorylation
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
RefSeqXP_002283521.10291014191003PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002316847.108101371013predicted protein [Populus trichocarpa]
RefSeqXP_002331720.1046102111936predicted protein [Populus trichocarpa]
RefSeqXP_002332763.10.00000000000493311109304predicted protein [Populus trichocarpa]
RefSeqXP_002332763.10105102138944predicted protein [Populus trichocarpa]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3ulz_A065994816308A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
PDB3uim_A065994816308A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation
PDB3tl8_H065994824316B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector
PDB3tl8_G065994824316B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector
PDB3tl8_D065994824316B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector
Transmembrane Domains
StartEnd
615637
Signal Peptide
Cleavage Site
18
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
HO7977604464058460
FE6894492976469420
DR9443542786609370
EY1123682726749450
JG5924352756399120
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_039_00020.3Aquca_039_00020.2Aquca_039_00020.1Aquca_039_00021.1Aquca_039_00015.1
Aquca_039_00022.1Aquca_039_00018.1Aquca_039_00016.1Aquca_039_00019.1Aquca_055_00015.1
Aquca_012_00201.2Aquca_012_00201.1Aquca_039_00012.3Aquca_039_00012.2Aquca_039_00012.1
Arabidopsis lyrata474473474471881264473178866958
885138473176470791478899
Arabidopsis thalianaAT1G53440.1AT1G53430.2AT1G53430.1AT1G29720.1AT1G53420.1
AT1G29740.1AT1G07650.2AT1G07650.1AT1G29730.1AT1G29750.2
AT1G29750.1AT3G14840.2
Brachypodium distachyonBradi3g08917.2Bradi3g08917.1Bradi4g28367.1
Brassica rapaBra038124Bra010815Bra032332Bra030168Bra018693
Bra030169Bra027306Bra032331Bra030170Bra001566
Bra027307Bra030167Bra030174Bra027302Bra021579
Bra030161Bra030166Bra001567Bra010817Bra032333
Bra010816
Carica papayaevm.TU.contig_37590.1evm.model.supercontig_77.40evm.model.supercontig_77.35evm.model.supercontig_124.19evm.model.supercontig_124.16
Capsella rubellaCarubv10011641mCarubv10012061mCarubv10012394mCarubv10006720mCarubv10008178m
Carubv10008435mCarubv10011126mCarubv10012882mCarubv10008187mCarubv10011709m
Carubv10008366mCarubv10021813mCarubv10016637mCarubv10011128m
Citrus clementinaCiclev10018721mCiclev10018686mCiclev10024314mCiclev10018908mCiclev10019246m
Ciclev10018771mCiclev10014830mCiclev10014765mCiclev10014427mCiclev10014395m
Ciclev10014258mCiclev10014129mCiclev10014126mCiclev10014125mCiclev10024045m
Ciclev10023853mCiclev10020672mCiclev10020826m
Citrus sinensisorange1.1g004275morange1.1g001768morange1.1g001767morange1.1g043333morange1.1g045177m
orange1.1g040908morange1.1g006906morange1.1g005361morange1.1g003737morange1.1g003134m
orange1.1g002899morange1.1g002566morange1.1g046961morange1.1g023918morange1.1g045835m
orange1.1g040398morange1.1g027337m
Cucumis sativusCucsa.273550.2Cucsa.273550.1Cucsa.057870.1Cucsa.057860.1Cucsa.212760.1
Cucsa.185230.1Cucsa.057940.1Cucsa.057890.1Cucsa.057880.1
Eucalyptus grandisEucgr.F01301.1Eucgr.F01305.3Eucgr.F01305.2Eucgr.F01305.1Eucgr.F01302.1
Eucgr.F01306.1Eucgr.F04179.1Eucgr.F04177.1Eucgr.F04178.1Eucgr.B00978.1
Eucgr.B00894.1Eucgr.B00963.1Eucgr.B00960.1Eucgr.B00972.1Eucgr.F01359.1
Eucgr.K01762.1Eucgr.K01777.2Eucgr.K01777.1Eucgr.K01737.1Eucgr.F01312.2
Eucgr.F01312.1Eucgr.E04067.1Eucgr.F01308.1Eucgr.F04180.1Eucgr.K01781.2
Eucgr.K01781.1Eucgr.G01055.1Eucgr.K01793.1Eucgr.F01310.1Eucgr.F01353.1
Eucgr.A01951.2Eucgr.K01759.1Eucgr.K01987.1Eucgr.K01985.1Eucgr.F01307.1
Eucgr.K02000.1Eucgr.A01951.1Eucgr.F01314.1Eucgr.K01743.1Eucgr.F01361.2
Eucgr.F01361.1Eucgr.F01357.1Eucgr.F01330.1Eucgr.K01724.1Eucgr.K01771.1
Eucgr.F01362.1Eucgr.F01313.1Eucgr.D00419.1Eucgr.D00415.1Eucgr.E02844.1
Eucgr.E02839.1Eucgr.E02843.1Eucgr.E02842.1Eucgr.D00417.2Eucgr.D00417.1
Fragaria vescamrna27319.1-v1.0-hybridmrna27321.1-v1.0-hybridmrna27328.1-v1.0-hybridmrna27326.1-v1.0-hybridmrna19789.1-v1.0-hybrid
mrna27330.1-v1.0-hybridmrna34059.1-v1.0-hybridmrna27329.1-v1.0-hybridmrna24842.1-v1.0-hybrid.782.946mrna24842.1-v1.0-hybrid.782.946
mrna24842.1-v1.0-hybrid.782.946mrna28915.1-v1.0-hybridmrna23790.1-v1.0-hybridmrna24842.1-v1.0-hybrid.324.449mrna24842.1-v1.0-hybrid.324.449
mrna24842.1-v1.0-hybrid.324.449
Glycine maxGlyma12g25460.2Glyma06g31630.2Glyma13g34140.3Glyma13g34140.2Glyma12g36090.1
Glyma12g36161.2Glyma12g36161.1Glyma12g36190.1Glyma13g34090.2Glyma02g45800.1
Glyma12g36170.2Glyma13g34100.1Glyma14g02990.1Glyma13g34066.5Glyma13g34066.4
Glyma13g34066.3Glyma13g34066.2Glyma13g34066.1Glyma01g29330.2Glyma01g29378.2
Glyma01g29378.1Glyma01g29362.2Glyma01g29362.1Glyma13g29640.1Glyma05g29530.2
Gossypium raimondiiGorai.009G363600.1Gorai.002G049000.1Gorai.007G329800.1Gorai.007G330600.1Gorai.007G330300.1
Gorai.007G330700.1Gorai.009G159600.2Gorai.009G159600.1Gorai.007G330500.2Gorai.007G330500.1
Gorai.009G159500.2Gorai.009G159500.1Gorai.009G159400.2Gorai.009G159400.1Gorai.002G048900.2
Gorai.002G048900.1Gorai.002G048600.1Gorai.002G048300.2Gorai.002G048300.1Gorai.006G003800.1
Gorai.010G162700.2Gorai.010G162700.1Gorai.009G159800.6Gorai.002G048800.2Gorai.002G048800.1
Gorai.007G330000.2Gorai.007G330000.1Gorai.010G162800.6Gorai.010G162800.5Gorai.010G162800.4
Gorai.010G162800.3Gorai.010G162800.2Gorai.010G162800.1Gorai.010G163000.1Gorai.009G159800.5
Gorai.009G159800.4Gorai.009G159800.3Gorai.009G159800.2Gorai.009G159800.1
Linum usitatissimumLus10005550Lus10038153Lus10042505Lus10010951Lus10031374
Lus10005418Lus10015239
Malus domesticaMDP0000292097MDP0000263999MDP0000280824MDP0000164991MDP0000314346
MDP0000158644MDP0000196032MDP0000232699MDP0000554411MDP0000204873
MDP0000228140MDP0000195070MDP0000304817MDP0000305229MDP0000197297
MDP0000222736MDP0000228029MDP0000212352MDP0000163412MDP0000207132
MDP0000199384MDP0000845743
Manihot esculentacassava4.1_002090mcassava4.1_000803mcassava4.1_031464mcassava4.1_001160mcassava4.1_001028m
cassava4.1_001039mcassava4.1_000765mcassava4.1_003034mcassava4.1_001048mcassava4.1_000840m
cassava4.1_024552mcassava4.1_025472mcassava4.1_025223mcassava4.1_030745mcassava4.1_004308m
cassava4.1_002534mcassava4.1_031454m
Medicago truncatulaMedtr8g058250.1Medtr2g075250.1Medtr2g075060.1Medtr2g075140.1Medtr2g074980.1
Medtr2g074990.1Medtr2g074840.1Medtr5g083910.1Medtr5g091950.1Medtr2g074880.1
Medtr8g057890.1Medtr8g057900.1Medtr8g087740.1
Mimulus guttatusmgv1a026921mmgv1a000913mmgv1a025582m
Oryza sativaLOC_Os09g17630.1LOC_Os02g13850.1
Panicum virgatumPavirv00034171m
Phaseolus vulgarisPhvul.005G079100.1Phvul.011G167800.1Phvul.005G077900.1Phvul.005G077600.1Phvul.005G077400.1
Phvul.005G078900.1Phvul.005G078500.1Phvul.011G067400.1Phvul.005G078400.1Phvul.008G264400.1
Phvul.005G078100.1Phvul.005G078600.1Phvul.006G170500.2Phvul.006G170500.1Phvul.002G242600.1
Populus trichocarpaPotri.003G025800.1Potri.001G385600.1Potri.001G385900.3Potri.001G385900.2Potri.001G385900.1
Potri.003G026300.1Potri.011G106400.1Potri.001G386300.3Potri.001G386300.2Potri.001G386300.1
Potri.003G025600.1Potri.001G385400.1Potri.001G385300.2Potri.001G386500.1Potri.019G009700.1
Potri.019G006000.1Potri.019G009500.1Potri.019G009800.2Potri.019G009800.1Potri.019G005700.1
Potri.019G008900.1Potri.019G005900.6Potri.019G005900.5Potri.019G005900.4Potri.019G005900.3
Potri.019G005900.2Potri.019G005900.1Potri.001G385200.3Potri.001G385200.2Potri.001G385200.1
Potri.019G005300.2Potri.019G005300.1Potri.016G061500.4Potri.016G061500.3Potri.016G061500.2
Potri.016G061500.1Potri.019G007900.1Potri.001G384700.1Potri.019G005000.2Potri.019G005000.1
Potri.T033300.1Potri.T010200.1Potri.001G308600.2Potri.001G308600.1Potri.004G135500.2
Potri.004G135500.1Potri.011G075300.1Potri.T008400.1Potri.T032500.4Potri.T032500.3
Potri.T032500.2Potri.T032500.1Potri.T008300.1Potri.011G073700.2Potri.011G073700.1
Potri.019G004800.1Potri.019G004600.1Potri.019G005200.2Potri.019G005200.1Potri.001G385500.1
Potri.T007800.1Potri.T009500.1Potri.T009000.1Potri.T009600.1Potri.T032700.6
Potri.T032700.5Potri.T032700.4Potri.T032700.3Potri.T032700.2Potri.T032700.1
Potri.011G072800.1Potri.T009900.1Potri.T072700.1Potri.011G072300.1Potri.004G063200.5
Potri.004G063200.4Potri.004G063200.3Potri.004G063200.2Potri.004G063200.1Potri.T032400.2
Potri.T032400.1Potri.011G072600.1Potri.011G075400.3Potri.011G075400.2Potri.011G075400.1
Potri.004G063500.1Potri.T009100.1Potri.T033000.1Potri.T032200.2Potri.T032200.1
Potri.T008600.2Potri.T008600.1Potri.004G063500.2Potri.016G012100.1Potri.016G011200.5
Potri.016G011200.4Potri.016G011200.1Potri.016G011400.2Potri.016G011400.1Potri.010G155600.1
Potri.006G014300.1Potri.T008900.1Potri.006G014100.2Potri.006G014100.1
Prunus persicappa000854mppa000741mppa000742mppa001005mppa000698m
ppa001122mppa001161mppa026371mppa017351mppa000939m
ppa000808mppa015564mppa001834mppa003884mppa021182m
Ricinus communis27894.m00077429628.m00076427894.m00077527894.m00077830026.m001493
29618.m00010230026.m001490.397.56830026.m001490.397.56830026.m00149230026.m001491
Setaria italicaSi016192mSi016254mSi016251mSi028799mSi028810m
Sorghum bicolorSb04g008350.1
Thellungiella halophilaThhalv10011204mThhalv10006670mThhalv10007070mThhalv10006761mThhalv10012029m
Thhalv10006680mThhalv10019958m
Vitis viniferaGSVIVT01014147001GSVIVT01014138001GSVIVT01014149001GSVIVT01014145001GSVIVT01014150001
GSVIVT01014134001GSVIVT01021289001GSVIVT01021285001GSVIVT01021291001GSVIVT01014128001
GSVIVT01021286001GSVIVT01014120001GSVIVT01014117001GSVIVT01034309001GSVIVT01014113001
GSVIVT01014110001GSVIVT01020786001GSVIVT01021278001GSVIVT01021297001GSVIVT01021293001
GSVIVT01021282001GSVIVT01000677001GSVIVT01021283001GSVIVT01021280001GSVIVT01001886001
GSVIVT01034320001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)