| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.001G394300.3 |
| Family | GT33 |
| Protein Properties | Length: 475 Molecular Weight: 53378.2 Isoelectric Point: 7.7496 |
| Chromosome | Chromosome/Scaffold: 01 Start: 41360521 End: 41365580 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT33 | 6 | 463 | 0 |
| RACVVVLGDIGRSPRMQYHALSLARQASLQVDIVAYGGSEPHMALRENQSIHIHKMKQWPAIPQGLPKMFKPFMLLLKPLFQFLMLLWYLCVKIPPPDVF LVQNPPSVPTLVAVKWASWLRNAKFIVDWHNFGYTLLALSLGRNSRFVTVYRWFERHYGKMAHGSLCVTRAMQHELTQNWGIKAAVLYDQPPEFFHPASL EEKHKLFCRLGKHISESQGVHDCASHGAVGMGSPNLNETLFTTMVADDIFLKPNRPALVVSSTSWTADEDFGILLEAAVMYDRRVAAILNEDDSTVEVLW NEMSAGKECLYPRLLFIITGKGPEKEKYEEKIRRLHLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVAYSCIKELV KVEKNGLLFSSSSELADELLMLFKGFPEECDALKLLRNGALEMGSSRWATEWEEHAKP | |||
| Full Sequence |
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| Protein Sequence Length: 475 Download |
| MGKRGRACVV VLGDIGRSPR MQYHALSLAR QASLQVDIVA YGGSEPHMAL RENQSIHIHK 60 MKQWPAIPQG LPKMFKPFML LLKPLFQFLM LLWYLCVKIP PPDVFLVQNP PSVPTLVAVK 120 WASWLRNAKF IVDWHNFGYT LLALSLGRNS RFVTVYRWFE RHYGKMAHGS LCVTRAMQHE 180 LTQNWGIKAA VLYDQPPEFF HPASLEEKHK LFCRLGKHIS ESQGVHDCAS HGAVGMGSPN 240 LNETLFTTMV ADDIFLKPNR PALVVSSTSW TADEDFGILL EAAVMYDRRV AAILNEDDST 300 VEVLWNEMSA GKECLYPRLL FIITGKGPEK EKYEEKIRRL HLKRVAFRTM WLSAEDYPLL 360 LGSADLGVCL HTSSSGLDLP MKVVDMFGCG LPVCAVAYSC IKELVKVEKN GLLFSSSSEL 420 ADELLMLFKG FPEECDALKL LRNGALEMGS SRWATEWEEH AKPLISEVIS QNLG* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG0438 | RfaG | 6.0e-5 | 337 | 429 | 95 | + Glycosyltransferase [Cell envelope biogenesis, outer membrane] | ||
| cd01635 | Glycosyltransferase_GTB_type | 1.0e-5 | 312 | 414 | 103 | + Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. | ||
| pfam13692 | Glyco_trans_1_4 | 2.0e-6 | 354 | 429 | 76 | + Glycosyl transferases group 1. | ||
| PLN02275 | PLN02275 | 0 | 1 | 428 | 428 | + transferase, transferring glycosyl groups | ||
| cd03816 | GT1_ALG1_like | 0 | 2 | 465 | 466 | + This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI19390.1 | 0 | 1 | 472 | 9 | 482 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_173105.1 | 0 | 1 | 471 | 1 | 461 | glycosyl transferase family 1 protein [Arabidopsis thaliana] |
| RefSeq | XP_002283369.1 | 0 | 1 | 470 | 124 | 595 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002330745.1 | 0 | 1 | 467 | 1 | 467 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002532170.1 | 0 | 1 | 472 | 1 | 474 | beta1,4 mannosyltransferase, putative [Ricinus communis] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| dolichyl-diphosphooligosaccharide biosynthesis | 2.4.1.142-RXN | EC-2.4.1.142 | chitobiosyldiphosphodolichol β-mannosyltransferase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DV132185 | 272 | 125 | 395 | 0 |
| GO921748 | 267 | 211 | 475 | 0 |
| JG909886 | 295 | 147 | 440 | 0 |
| DR940879 | 269 | 28 | 296 | 0 |
| GO872658 | 323 | 3 | 324 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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