y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.001G399500.1 |
Family | GT14 |
Protein Properties | Length: 420 Molecular Weight: 47754.2 Isoelectric Point: 9.5335 |
Chromosome | Chromosome/Scaffold: 01 Start: 42111736 End: 42115574 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 78 | 333 | 0 |
FAYLVSGSKGDLEKLWRTLHSLYHPRNQYVVHLDLESPANERLELASRVEKHPVFSKVGNVYMISKANMVTYKGPTMVANTLHACAILLKMGKDWDWFIN LSASDYPLVTQDDLIHTFSTINRNLNFIEHTSKLEWKADKRAMPLIVDPGLYSTTKADIYWAMPRRSLPTAFKLFTGSAWMVLTRSFVEYLIWGWDNLPR TLLMYYTNFVSSPEGYFHTVICNVPEYAQTAVSHDLHYIAWDNPPKQHPHTLTLND |
Full Sequence |
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Protein Sequence Length: 420 Download |
MGSLNVEKRW AFPLVISSLI CLFLLATCFN MGLVSSLHTI NQIFNIFQFR INQTTEVYAE 60 TKVSQSPPPP LPSQIPRFAY LVSGSKGDLE KLWRTLHSLY HPRNQYVVHL DLESPANERL 120 ELASRVEKHP VFSKVGNVYM ISKANMVTYK GPTMVANTLH ACAILLKMGK DWDWFINLSA 180 SDYPLVTQDD LIHTFSTINR NLNFIEHTSK LEWKADKRAM PLIVDPGLYS TTKADIYWAM 240 PRRSLPTAFK LFTGSAWMVL TRSFVEYLIW GWDNLPRTLL MYYTNFVSSP EGYFHTVICN 300 VPEYAQTAVS HDLHYIAWDN PPKQHPHTLT LNDTDHMIAS GAAFARKFKR DDPVLDKIDK 360 DLLHRKNGSF TPGGWCSGKP KCSEVGDLDK IKPGPGAHRL KRLIARVALN TKLKQNQCK* 420 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 2.0e-82 | 78 | 338 | 265 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 0 | 1 | 419 | 421 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI20295.1 | 0 | 6 | 419 | 1 | 416 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002285024.1 | 0 | 1 | 419 | 1 | 421 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002317501.1 | 0 | 1 | 419 | 1 | 419 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002329084.1 | 0 | 1 | 419 | 1 | 419 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002533550.1 | 0 | 1 | 419 | 1 | 417 | acetylglucosaminyltransferase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.0000000000002 | 89 | 303 | 96 | 294 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.0000000000002 | 89 | 303 | 96 | 294 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.0000000000002 | 89 | 303 | 96 | 294 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.0000000000002 | 89 | 303 | 96 | 294 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.0000000000006 | 89 | 303 | 96 | 294 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |