Basic Information | |
---|---|
Species | Populus trichocarpa |
Cazyme ID | Potri.001G401100.1 |
Family | AA1 |
Protein Properties | Length: 582 Molecular Weight: 64264.1 Isoelectric Point: 9.4105 |
Chromosome | Chromosome/Scaffold: 01 Start: 42260097 End: 42262383 |
Description | laccase 17 |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
AA1 | 32 | 567 | 0 |
ITRHYKFDVLLQNVTRLCHTKSMVTVNAKFPGPCIVAREGDRLLIKVVNHVQNNISIHWHGIRQLRSGWADGPAYVTQCPIQTGQSYVYNYTIVGQRGTL WWHAHISWLRSTLYGPLIILPKLGTPYPFAKPDKEVPIIFGEWFNADPEAIINQAMQTGGGPNVSDAYTINGLPGPLYNCSAKNTFKLKVKPGKTYLLRL INAALNEELFFSIANHTLTVVGVDAIYVKPFDTETLLIASGQTTDVLLKTKPHHPDAKFFMSARPYVTGQGTFDNSTVAGILEYEVARKTIQSSHTSKRL PLYKPNLPPLNDTSFATNFTSKLRSLASAEFPANVPQKVDRHFFFTVGLGTNPCSKNQTCQGPNGTRFAASVNNVSFVMPTKALLEAHHFGQSKGVYSPN FPISPLIPFDYTGTPQNNTMVSHGTKLVMLPFNTSVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPKKDPANFNLVDPVERNTVGVPSGGWVAI RFLADNPGVWFLHCHVELHMSWGLMMAWVVLDGKLP |
Full Sequence |
---|
Protein Sequence Length: 582 Download |
MGVYLLPSPA SLAVFLSSFV TLFVHPRPAI AITRHYKFDV LLQNVTRLCH TKSMVTVNAK 60 FPGPCIVARE GDRLLIKVVN HVQNNISIHW HGIRQLRSGW ADGPAYVTQC PIQTGQSYVY 120 NYTIVGQRGT LWWHAHISWL RSTLYGPLII LPKLGTPYPF AKPDKEVPII FGEWFNADPE 180 AIINQAMQTG GGPNVSDAYT INGLPGPLYN CSAKNTFKLK VKPGKTYLLR LINAALNEEL 240 FFSIANHTLT VVGVDAIYVK PFDTETLLIA SGQTTDVLLK TKPHHPDAKF FMSARPYVTG 300 QGTFDNSTVA GILEYEVARK TIQSSHTSKR LPLYKPNLPP LNDTSFATNF TSKLRSLASA 360 EFPANVPQKV DRHFFFTVGL GTNPCSKNQT CQGPNGTRFA ASVNNVSFVM PTKALLEAHH 420 FGQSKGVYSP NFPISPLIPF DYTGTPQNNT MVSHGTKLVM LPFNTSVELI MQDTSILGAE 480 SHPLHLHGFN FFVVGQGFGN FDPKKDPANF NLVDPVERNT VGVPSGGWVA IRFLADNPGV 540 WFLHCHVELH MSWGLMMAWV VLDGKLPNHR LLPPPVDLPK C* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07732 | Cu-oxidase_3 | 2.0e-50 | 44 | 153 | 112 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02191 | PLN02191 | 3.0e-64 | 29 | 571 | 577 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 8.0e-71 | 12 | 555 | 584 | + oxidoreductase | ||
TIGR03388 | ascorbase | 2.0e-85 | 33 | 567 | 571 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 31 | 581 | 552 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002299296.1 | 0 | 1 | 581 | 1 | 581 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002317504.1 | 0 | 12 | 581 | 1 | 570 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002317505.1 | 0 | 1 | 581 | 1 | 581 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002329137.1 | 0 | 1 | 581 | 1 | 581 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002329138.1 | 0 | 1 | 581 | 1 | 581 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 34 | 571 | 4 | 536 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1asq_A | 0 | 34 | 571 | 4 | 536 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1asp_B | 0 | 34 | 571 | 4 | 536 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1asp_A | 0 | 34 | 571 | 4 | 536 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1aso_B | 0 | 34 | 571 | 4 | 536 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |