Basic Information | |
---|---|
Species | Populus trichocarpa |
Cazyme ID | Potri.001G401300.1 |
Family | AA1 |
Protein Properties | Length: 582 Molecular Weight: 64197.9 Isoelectric Point: 9.4969 |
Chromosome | Chromosome/Scaffold: 01 Start: 42273207 End: 42275954 |
Description | laccase 17 |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
AA1 | 32 | 567 | 0 |
ITRHYKFDVMLQNVTRLCHTKSIVTVNGKFPGPRIVAREGDRLLIKVVNHVQNNISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYVYNYTIVGQRGTL WWHAHISWLRSTLYGPLIILPKLGTTYPFAKPHKEVPIIFGEWFNADPEAIINQAMQTGGGPNVSDAYTINGFPGPLYNCSAKDTFKLKVKPGKTYLLRM INAALNDELFFSIANHTLTVVDVDAIYVKPFDTETLLIAPGQTTNVLLKTKPHHPNASFFMSARPYVTGQGTFDNSTVAGILEYEESNKTIKSSHSPKKL PFYKPNLPPLNDTSFATNFTSKLRSLASAEFPANVPQKVDRQFFFSVSLGTNPCSKNKTCQGPNGTMFAASVNNVSFVMPTKALLQAHHFGQSKGVYSPN FPINPLIPFNYTGTPPNNTMVSNGTKLVVLPFNTSVELIMQDTSILGAESHPLHLHGFNFFVVGEGFGNFDPKKDPANFNLVDPVERNTVGVPSGGWVAI RFLADNPGVWFMHCHLEVHTSWGLKMAWVVLDGKLP |
Full Sequence |
---|
Protein Sequence Length: 582 Download |
MGASFLPSPA FLAVFLISFV TLSIHPEPAL AITRHYKFDV MLQNVTRLCH TKSIVTVNGK 60 FPGPRIVARE GDRLLIKVVN HVQNNISIHW HGIRQLRSGW ADGPAYITQC PIQTGQSYVY 120 NYTIVGQRGT LWWHAHISWL RSTLYGPLII LPKLGTTYPF AKPHKEVPII FGEWFNADPE 180 AIINQAMQTG GGPNVSDAYT INGFPGPLYN CSAKDTFKLK VKPGKTYLLR MINAALNDEL 240 FFSIANHTLT VVDVDAIYVK PFDTETLLIA PGQTTNVLLK TKPHHPNASF FMSARPYVTG 300 QGTFDNSTVA GILEYEESNK TIKSSHSPKK LPFYKPNLPP LNDTSFATNF TSKLRSLASA 360 EFPANVPQKV DRQFFFSVSL GTNPCSKNKT CQGPNGTMFA ASVNNVSFVM PTKALLQAHH 420 FGQSKGVYSP NFPINPLIPF NYTGTPPNNT MVSNGTKLVV LPFNTSVELI MQDTSILGAE 480 SHPLHLHGFN FFVVGEGFGN FDPKKDPANF NLVDPVERNT VGVPSGGWVA IRFLADNPGV 540 WFMHCHLEVH TSWGLKMAWV VLDGKLPNQK LLPPPADLPK C* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07732 | Cu-oxidase_3 | 4.0e-52 | 44 | 153 | 112 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02191 | PLN02191 | 1.0e-66 | 15 | 571 | 590 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 2.0e-73 | 10 | 568 | 592 | + oxidoreductase | ||
TIGR03388 | ascorbase | 8.0e-88 | 33 | 571 | 578 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 31 | 581 | 552 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002299296.1 | 0 | 1 | 581 | 1 | 581 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002317504.1 | 0 | 12 | 581 | 1 | 570 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002317505.1 | 0 | 1 | 581 | 1 | 581 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002329137.1 | 0 | 1 | 581 | 1 | 581 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002329138.1 | 0 | 1 | 581 | 1 | 581 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 34 | 571 | 4 | 536 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1asq_A | 0 | 34 | 571 | 4 | 536 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1asp_B | 0 | 34 | 571 | 4 | 536 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1asp_A | 0 | 34 | 571 | 4 | 536 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1aso_B | 0 | 34 | 571 | 4 | 536 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |