y
Basic Information | |
---|---|
Species | Populus trichocarpa |
Cazyme ID | Potri.001G416800.1 |
Family | GT8 |
Protein Properties | Length: 534 Molecular Weight: 60641.3 Isoelectric Point: 9.4685 |
Chromosome | Chromosome/Scaffold: 01 Start: 44144818 End: 44148920 |
Description | galacturonosyltransferase 12 |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT8 | 173 | 505 | 0 |
CLALRLASEHSTNAAARLQLPLPELVPALVDNTYFHFVLASDNVLAAAVVANSLVQNALRPQKFVLHIITDRKTYSPMQAWFSLHPLAPAIIEVKALHHF DWFAKGKVPVMEAMEKDQRVRSQFRGGSSAIVANNTEKPHIIAAKLQTLSPKYNSVMNHIRIHLPELFPSLNKVVFLDDDIVVQSDLSPLWDIDMNGKVN GAVETCRGEDKFVMSKKLKSYLNFSHPLISENFKPNECAWAYGMNIFDLEAWRKTNISTTYHHWVEENLKSDLSLWQLGTLPPGLIAFHGHVHVIDPFWH MLGLGYQENTSLADAETAGVIHFNGRAKPWLDI |
Full Sequence |
---|
Protein Sequence Length: 534 Download |
MQLHISPSLR HVTVFPGKGV REFIKVRVGA RRVSYRMLFY SLLFFTFLLR FVFVLSTVDS 60 IDGETKCSTL GCLGKRLGPR ILGRRLDSAV PEVMFQVLEQ PLGNDELKGR SDIPQTLEEF 120 MDEVKNTRLD AKTFALKLRE MVTLLEQRTR NAKIQEYLYR HVASSSIPKQ LHCLALRLAS 180 EHSTNAAARL QLPLPELVPA LVDNTYFHFV LASDNVLAAA VVANSLVQNA LRPQKFVLHI 240 ITDRKTYSPM QAWFSLHPLA PAIIEVKALH HFDWFAKGKV PVMEAMEKDQ RVRSQFRGGS 300 SAIVANNTEK PHIIAAKLQT LSPKYNSVMN HIRIHLPELF PSLNKVVFLD DDIVVQSDLS 360 PLWDIDMNGK VNGAVETCRG EDKFVMSKKL KSYLNFSHPL ISENFKPNEC AWAYGMNIFD 420 LEAWRKTNIS TTYHHWVEEN LKSDLSLWQL GTLPPGLIAF HGHVHVIDPF WHMLGLGYQE 480 NTSLADAETA GVIHFNGRAK PWLDIAFPQL RPLWAKYINF SDKFIKGCHI RPS* 540 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02523 | PLN02523 | 1.0e-116 | 110 | 532 | 423 | + galacturonosyltransferase | ||
PLN02742 | PLN02742 | 4.0e-120 | 130 | 531 | 402 | + Probable galacturonosyltransferase | ||
PLN02867 | PLN02867 | 8.0e-150 | 68 | 530 | 465 | + Probable galacturonosyltransferase | ||
PLN02659 | PLN02659 | 0 | 1 | 533 | 534 | + Probable galacturonosyltransferase | ||
PLN02870 | PLN02870 | 0 | 1 | 530 | 531 | + Probable galacturonosyltransferase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABP65660.1 | 0 | 1 | 533 | 1 | 533 | secondary wall-associated glycosyltransferase family 8D [Populus tremula x Populus alba] |
EMBL | CBI20502.1 | 0 | 1 | 533 | 1 | 533 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002282637.1 | 0 | 1 | 533 | 1 | 534 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002317564.1 | 0 | 1 | 531 | 1 | 531 | glycosyltransferase, CAZy family GT8 [Populus trichocarpa] |
RefSeq | XP_002319802.1 | 0 | 1 | 533 | 1 | 533 | glycosyltransferase, CAZy family GT8 [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ss9_A | 0.000007 | 321 | 502 | 74 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1ga8_A | 0.000008 | 321 | 502 | 74 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1g9r_A | 0.000008 | 321 | 502 | 74 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |