| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.001G449100.5 |
| Family | GH17 |
| Protein Properties | Length: 391 Molecular Weight: 42170.1 Isoelectric Point: 7.6417 |
| Chromosome | Chromosome/Scaffold: 01 Start: 48338858 End: 48340526 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH17 | 28 | 344 | 0 |
| IGINYGQIANNLPTPDNVIPLVKSIGATKVKLYDADPRVLKAFANTGVEFIVGLGNEYLSKMRDPDKAQAWVKANVQAYLPATKITCITIGNEILTLNDT SLTDNLLPAMQGIQTALVNLGLDKQVSVTTAHSLAVLDVSFPPSAGSFRKDLVGSITPILNFHAKTNSPFLINAYPFFAFKSNPKQVSLDFVLFQPNQGV VDPKSNFHYDNMLFAQIDAVYSALASLGYSKLPVHISETGWPSKGDEDEVGATLENAKKYNGNLFKTICQRKGTPMRPNTDLNIYVFALFNENMKPGPTS ERNYGLFKPDGSPAYLL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 391 Download |
| MEHSRFYYHV SLILSISGLV FPVMVGSIGI NYGQIANNLP TPDNVIPLVK SIGATKVKLY 60 DADPRVLKAF ANTGVEFIVG LGNEYLSKMR DPDKAQAWVK ANVQAYLPAT KITCITIGNE 120 ILTLNDTSLT DNLLPAMQGI QTALVNLGLD KQVSVTTAHS LAVLDVSFPP SAGSFRKDLV 180 GSITPILNFH AKTNSPFLIN AYPFFAFKSN PKQVSLDFVL FQPNQGVVDP KSNFHYDNML 240 FAQIDAVYSA LASLGYSKLP VHISETGWPS KGDEDEVGAT LENAKKYNGN LFKTICQRKG 300 TPMRPNTDLN IYVFALFNEN MKPGPTSERN YGLFKPDGSP AYLLGINGTD AISTNSTPTT 360 AATTTTSPAP RSPESSSTGY LSISAAVKIE * |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| COG5309 | COG5309 | 0.0003 | 56 | 323 | 282 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] |
| pfam00332 | Glyco_hydro_17 | 4.0e-93 | 28 | 342 | 316 | + Glycosyl hydrolases family 17. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PIR | 0 | 22 | 352 | 26 | 356 | UP10_LACSN Unknown protein 10 from 2D-PAGE | |
| RefSeq | XP_002278950.1 | 0 | 34 | 388 | 33 | 383 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002300505.1 | 0 | 17 | 346 | 4 | 333 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002317055.1 | 0 | 24 | 356 | 1 | 333 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518930.1 | 0 | 1 | 386 | 1 | 381 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 28 | 344 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_D | 0 | 28 | 344 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_C | 0 | 28 | 344 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_B | 0 | 28 | 344 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_A | 0 | 28 | 344 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
