Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.002G081900.1 |
Family | AA2 |
Protein Properties | Length: 378 Molecular Weight: 41003.4 Isoelectric Point: 8.9101 |
Chromosome | Chromosome/Scaffold: 02 Start: 5708748 End: 5712701 |
Description | thylakoidal ascorbate peroxidase |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA2 | 100 | 349 | 0 |
DIKELLKSKSCHPILVRLGWHDSGTYNKNIEEWPRMGGANGSLRFDIELKHAANAGLVNALKLIKPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKY GRVDVSAPEECPEEGRLPAAGPPKPADHLREVFYRMGLNDKEIVALSGAHTLGRSRPERSGWGKPETKYTKNGPGAPGGQSWTAEWLKFDNSYFKDIKQR KDDDLLVLPTDAALFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGA |
Full Sequence |
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Protein Sequence Length: 378 Download |
MAQYPSSLTL SPPKSQPMAS LRGSAATVRL LHSASRVRLS LSSASSSLSI SSSSSYSPSS 60 LKCLQFSPLA PHIFKDQNRS SMSTVAAASD PAQLKSARED IKELLKSKSC HPILVRLGWH 120 DSGTYNKNIE EWPRMGGANG SLRFDIELKH AANAGLVNAL KLIKPIKDKY SGVTYADLFQ 180 LASATAIEEA GGPKIPMKYG RVDVSAPEEC PEEGRLPAAG PPKPADHLRE VFYRMGLNDK 240 EIVALSGAHT LGRSRPERSG WGKPETKYTK NGPGAPGGQS WTAEWLKFDN SYFKDIKQRK 300 DDDLLVLPTD AALFEDPSFK VYAEKYAEDQ EAFFKDYAEA HAKLSNLGAK FDPQEGIVLD 360 GVAGEKFMAA KYSSGKD* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00141 | peroxidase | 4.0e-50 | 97 | 329 | 241 | + Peroxidase. | ||
PLN02364 | PLN02364 | 6.0e-65 | 94 | 348 | 256 | + L-ascorbate peroxidase 1 | ||
PLN02879 | PLN02879 | 2.0e-66 | 94 | 348 | 255 | + L-ascorbate peroxidase | ||
PLN02608 | PLN02608 | 3.0e-94 | 92 | 348 | 257 | + L-ascorbate peroxidase | ||
cd00691 | ascorbate_peroxidase | 1.0e-146 | 82 | 352 | 275 | + Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water. |
Gene Ontology | |
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GO Term | Description |
GO:0004601 | peroxidase activity |
GO:0006979 | response to oxidative stress |
GO:0020037 | heme binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC19394.1 | 0 | 63 | 377 | 53 | 380 | stromal L-ascorbate peroxidase precursor [Mesembryanthemum crystallinum] |
GenBank | AAS55853.1 | 0 | 62 | 377 | 35 | 364 | chloroplast stromal ascorbate peroxidase [Vigna unguiculata] |
RefSeq | XP_002300978.1 | 0 | 18 | 356 | 1 | 339 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002307442.1 | 0 | 87 | 376 | 1 | 290 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002520353.1 | 0 | 1 | 377 | 1 | 379 | Cytochrome c peroxidase, mitochondrial precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1iyn_A | 0 | 87 | 377 | 1 | 295 | A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase From Tobacco Plants And Structural Insights For Its Instability |
PDB | 1apx_D | 0 | 94 | 348 | 15 | 245 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
PDB | 1apx_C | 0 | 94 | 348 | 15 | 245 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
PDB | 1apx_B | 0 | 94 | 348 | 15 | 245 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
PDB | 1apx_A | 0 | 94 | 348 | 15 | 245 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
L-ascorbate degradation III | RXN-12440 | EC-1.11.1.11 | L-ascorbate peroxidase |
L-ascorbate degradation V | RXN-12440 | EC-1.11.1.11 | L-ascorbate peroxidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO779395 | 331 | 62 | 378 | 0 |
EX262979 | 311 | 74 | 376 | 0 |
GO599900 | 299 | 78 | 376 | 0 |
DY277270 | 316 | 65 | 377 | 0 |
DY297167 | 280 | 65 | 341 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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