y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.002G093000.1 |
Family | GH5 |
Protein Properties | Length: 323 Molecular Weight: 35729.2 Isoelectric Point: 6.882 |
Chromosome | Chromosome/Scaffold: 02 Start: 6659729 End: 6663001 |
Description | |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 98 | 302 | 5.2e-26 |
DHWRAFIVEDDFKFISQKRINSVRIPVGWWIASDPTPPQPCVGGSLKALDNAFLWALKYESKVVIDQHAAPDSQNGWELSSSTDGSQEWDQTDANAEQTV DVIDFLTAGMQKSPSLYAVELMNERRAPGASLDSATKYYKAGDDAVRKHSPAAYVVMSNRLSSDGPRELFPRAGGLTGSVIDVHYYNLFSDVFNGMRVQQ NIDFI |
Full Sequence |
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Protein Sequence Length: 323 Download |
MPMGLTSGRS EKLEIVRNSN DSIRVRIKAS KGFFLQHRLY CQLLAKTEEL VRPDNASDSK 60 WGDDVHPTSV FYAPPPLAGG FQVTNGYGPK LAPQVVRDHW RAFIVEDDFK FISQKRINSV 120 RIPVGWWIAS DPTPPQPCVG GSLKALDNAF LWALKYESKV VIDQHAAPDS QNGWELSSST 180 DGSQEWDQTD ANAEQTVDVI DFLTAGMQKS PSLYAVELMN ERRAPGASLD SATKYYKAGD 240 DAVRKHSPAA YVVMSNRLSS DGPRELFPRA GGLTGSVIDV HYYNLFSDVF NGMRVQQNID 300 FIHTNRSAQL NYVTTAGLPK IC* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00150 | Cellulase | 0.002 | 99 | 283 | 197 | + Cellulase (glycosyl hydrolase family 5). | ||
COG2730 | BglC | 7.0e-20 | 67 | 288 | 231 | + Endoglucanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ15852.1 | 0 | 8 | 314 | 106 | 402 | hypothetical protein OsJ_31271 [Oryza sativa Japonica Group] |
RefSeq | XP_002285806.1 | 0 | 6 | 319 | 139 | 444 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002440848.1 | 0 | 11 | 319 | 172 | 473 | hypothetical protein SORBIDRAFT_09g008170 [Sorghum bicolor] |
RefSeq | XP_002464704.1 | 0 | 6 | 314 | 145 | 444 | hypothetical protein SORBIDRAFT_01g024390 [Sorghum bicolor] |
RefSeq | XP_002513884.1 | 0 | 6 | 319 | 137 | 442 | conserved hypothetical protein [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1eqp_A | 1e-22 | 81 | 300 | 46 | 262 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
PDB | 1eqc_A | 2e-22 | 81 | 300 | 46 | 262 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
PDB | 1cz1_A | 2e-22 | 81 | 300 | 46 | 262 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A Resolution |
PDB | 2pc8_A | 2e-22 | 81 | 300 | 52 | 268 | A Chain A, E292q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans In Complex With Two Separately Bound Glucopyranoside Units At 1.8 A |
PDB | 2pbo_A | 2e-22 | 81 | 300 | 52 | 268 | A Chain A, E27q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GE603308 | 245 | 77 | 321 | 0 |
DV219944 | 232 | 88 | 319 | 0 |
JG564701 | 243 | 77 | 319 | 0 |
FN750940 | 231 | 92 | 322 | 0 |
CX659977 | 216 | 6 | 221 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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