Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.002G093900.2 |
Family | GH3 |
Protein Properties | Length: 743 Molecular Weight: 82078.7 Isoelectric Point: 8.3512 |
Chromosome | Chromosome/Scaffold: 02 Start: 6717053 End: 6721139 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 79 | 331 | 0 |
AIPRLGIPAYEWWSEALHGVALQTTVRQGIRFNGTIRFATSFPQVILTAASFDAHLWYRIGQVIGKEARGIYNAGQATGMTFWAPNINIFRDPRWGRGQE TPGEDPLVAGKYAVSYVRGVQGDSFGGGTLGEQLQASACCKHFTAYDLDKWKGMNRFVFDAQDLADTYQPPFQSCIQEGKASGIMCAYNRVNGVPNCADY NLLSKKARGQWGFYGYITSDCDAVAIIHDDQGYAKSPEDAVADVLKAGMDVNC |
Full Sequence |
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Protein Sequence Length: 743 Download |
MRLQNLCLRI LILIAIHTTS LHLYVESTQP PYSCDSSDPS TKLYPFCQTK LPISQRVEDL 60 VSRLTLDEKV SQLVDTAPAI PRLGIPAYEW WSEALHGVAL QTTVRQGIRF NGTIRFATSF 120 PQVILTAASF DAHLWYRIGQ VIGKEARGIY NAGQATGMTF WAPNINIFRD PRWGRGQETP 180 GEDPLVAGKY AVSYVRGVQG DSFGGGTLGE QLQASACCKH FTAYDLDKWK GMNRFVFDAQ 240 DLADTYQPPF QSCIQEGKAS GIMCAYNRVN GVPNCADYNL LSKKARGQWG FYGYITSDCD 300 AVAIIHDDQG YAKSPEDAVA DVLKAGMDVN CGDYLKNYTK SAVKKKKLPE SEIDRALHNL 360 FSIRMRLGLF NGNPTKQPYG NIAPDQVCSQ EHQALALKAA QDGIVLLKNP DKLLPLSKLE 420 TKSLAVIGPN ANNSTKLLGN YFGPPCKTVT PLQGLQNYIK NTRYHPGCSR VACSSASINQ 480 AVKIAKGADQ VILVMGLDQT QEKEEQDRVD LVLPGKQREL ITAVAKAAKK PVVLVLFCGG 540 PVDVSFAKYD QNIGSIIWAG YPGEAGGTAL AQIIFGDHNP GGRLPMTWYP QDFTKVPMTD 600 MRMRPQLSSG YPGRTYRFYN GKKVFEFGYG LSYSNYSYEL ASDAQNKLYL RASSNQITKN 660 SNTIRHKLIS NIGKELCEKT KFTVTVRVKN HGEMAGENAE IQYELSPCEH LSSPDDRGMM 720 VMEEGSQFLL IGDKEYPITI IF* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 1.0e-55 | 77 | 469 | 402 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam01915 | Glyco_hydro_3_C | 1.0e-56 | 404 | 634 | 237 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
pfam00933 | Glyco_hydro_3 | 9.0e-64 | 65 | 356 | 323 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 3.0e-79 | 45 | 697 | 722 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 1 | 740 | 792 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002285805.1 | 0 | 1 | 741 | 1 | 773 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002302284.1 | 0 | 1 | 742 | 1 | 742 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002302285.1 | 0 | 1 | 742 | 1 | 773 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002306583.1 | 0 | 1 | 741 | 1 | 744 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002513892.1 | 0 | 1 | 741 | 1 | 773 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 116 | 638 | 89 | 624 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
PDB | 3u48_A | 0 | 116 | 638 | 89 | 624 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
PDB | 3u4a_B | 0 | 116 | 638 | 89 | 624 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
PDB | 3u4a_A | 0 | 116 | 638 | 89 | 624 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
PDB | 2x41_A | 7.00649e-43 | 55 | 638 | 2 | 605 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |