y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.002G094000.2 |
Family | GH3 |
Protein Properties | Length: 644 Molecular Weight: 70274.2 Isoelectric Point: 8.1579 |
Chromosome | Chromosome/Scaffold: 02 Start: 6722714 End: 6727414 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 76 | 328 | 0 |
IPRLGIPGYEWWSEALHGVSNAGPGIHFNDNIKGATSFPQVILTAASFDAYQWYRIGQAIGKEARALYNAGQATGMTFWAPNINIFRDPRWGRGQETPGE DPLVTGLYAASYVKGVQGDSFEGGKIKGHLQASACCKHFTAYDLDNWKGMNRFVFDARVTMQDLADTYQPPFKSCVEQGRASGIMCAYNKVNGVPSCADS NLLSKTARAQWGFRGYITSDCDAVSIIHDDQGYAKSPEDAVVDVLKAGMDVNC |
Full Sequence |
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Protein Sequence Length: 644 Download |
MRPKKLCFFT FTFFTLSVLR VESTQPPFSC DSSNPSTKAF PFCETTLPIS QRARDLVSRL 60 TLDEKISQLV NSAPPIPRLG IPGYEWWSEA LHGVSNAGPG IHFNDNIKGA TSFPQVILTA 120 ASFDAYQWYR IGQAIGKEAR ALYNAGQATG MTFWAPNINI FRDPRWGRGQ ETPGEDPLVT 180 GLYAASYVKG VQGDSFEGGK IKGHLQASAC CKHFTAYDLD NWKGMNRFVF DARVTMQDLA 240 DTYQPPFKSC VEQGRASGIM CAYNKVNGVP SCADSNLLSK TARAQWGFRG YITSDCDAVS 300 IIHDDQGYAK SPEDAVVDVL KAGMDVNCGS YLLKHAKVAV EQKKLSESDI DKALHNLFSV 360 RMRLGLFNGR PEGQLFGNIG PDQVCSQEHQ ILALEAARNG IVLLKNSARL LPLSKSKTKS 420 LAVIGPNANS GQMLLGNYAG PPCRFVTPLQ ALQSYIKQTV YHPACDTVQC SSASVDRAVD 480 VAKGADNVVL MMGLDQTQER EELDRTDLLL PGKQQELIIA VAKAAKNPVV LVLFSGGPVD 540 ISFAKNDKNI GSILWAGYPG EGGAIALAEI VFGDHNPGGR LPMTWYPQEF VKVPMTDMGM 600 RPEASSGYPG RTYSCLPKHT LLKSVVNNAY NQRLRLSSFH IDF* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 2.0e-43 | 401 | 589 | 195 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 6.0e-51 | 76 | 431 | 364 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
PRK15098 | PRK15098 | 5.0e-66 | 32 | 595 | 634 | + beta-D-glucoside glucohydrolase; Provisional | ||
pfam00933 | Glyco_hydro_3 | 3.0e-69 | 61 | 353 | 322 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PLN03080 | PLN03080 | 0 | 22 | 613 | 597 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002285805.1 | 0 | 1 | 613 | 1 | 614 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002302284.1 | 0 | 1 | 613 | 1 | 616 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002302285.1 | 0 | 1 | 613 | 1 | 613 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002306583.1 | 0 | 1 | 613 | 1 | 613 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002513892.1 | 0 | 1 | 613 | 1 | 614 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 47 | 595 | 1 | 578 | A Chain A, Crystal Structure Of Yersinia Enterocolitica Salicylate Synthase (Irp9) |
PDB | 3u48_A | 0 | 47 | 595 | 1 | 578 | A Chain A, Crystal Structure Of Yersinia Enterocolitica Salicylate Synthase (Irp9) |
PDB | 3u4a_B | 0 | 47 | 595 | 1 | 578 | A Chain A, Crystal Structure Of Yersinia Enterocolitica Salicylate Synthase (Irp9) |
PDB | 3u4a_A | 0 | 47 | 595 | 1 | 578 | A Chain A, Crystal Structure Of Yersinia Enterocolitica Salicylate Synthase (Irp9) |
PDB | 4i3g_B | 6e-39 | 50 | 428 | 51 | 401 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |