Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.002G094000.5 |
Family | GH3 |
Protein Properties | Length: 739 Molecular Weight: 80952.2 Isoelectric Point: 7.4667 |
Chromosome | Chromosome/Scaffold: 02 Start: 6722714 End: 6727414 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 145 | 293 | 5.6e-39 |
AGQATASYVKGVQGDSFEGGKIKGHLQASACCKHFTAYDLDNWKGMNRFVFDARVTMQDLADTYQPPFKSCVEQGRASGIMCAYNKVNGVPSCADSNLLS KTARAQWGFRGYITSDCDAVSIIHDDQGYAKSPEDAVVDVLKAGMDVNC |
Full Sequence |
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Protein Sequence Length: 739 Download |
MRPKKLCFFT FTFFTLSVLR VESTQPPFSC DSSNPSTKAF PFCETTLPIS QRARDLVSRL 60 TLDEKISQLV NSAPPIPRLG IPGYEWWSEA LHGVSNAGPG IHFNDNIKGA TSFPQVILTA 120 ASFDAYQWYR IGQAIGKEAR ALYNAGQATA SYVKGVQGDS FEGGKIKGHL QASACCKHFT 180 AYDLDNWKGM NRFVFDARVT MQDLADTYQP PFKSCVEQGR ASGIMCAYNK VNGVPSCADS 240 NLLSKTARAQ WGFRGYITSD CDAVSIIHDD QGYAKSPEDA VVDVLKAGMD VNCGSYLLKH 300 AKVAVEQKKL SESDIDKALH NLFSVRMRLG LFNGRPEGQL FGNIGPDQVC SQEHQILALE 360 AARNGIVLLK NSARLLPLSK SKTKSLAVIG PNANSGQMLL GNYAGPPCRF VTPLQALQSY 420 IKQTVYHPAC DTVQCSSASV DRAVDVAKGA DNVVLMMGLD QTQEREELDR TDLLLPGKQQ 480 ELIIAVAKAA KNPVVLVLFS GGPVDISFAK NDKNIGSILW AGYPGEGGAI ALAEIVFGDH 540 NPGGRLPMTW YPQEFVKVPM TDMGMRPEAS SGYPGRTYRF YRGRSVFEFG YGISYSKYSY 600 ELTAVSQNTL YLNQSSTMHI INDFDSVRST LISELGTEFC EQNKCRARIG VKNHGEMAGK 660 HPVLLFARQE KHGNGRPRKQ LIGFQSVVLG AGERAEIEFE VSPCEHLSRA NEDGLMVMEE 720 GRHFLVVDGD EYPISVVI* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 2.0e-35 | 76 | 396 | 357 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam01915 | Glyco_hydro_3_C | 6.0e-48 | 366 | 596 | 237 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
pfam00933 | Glyco_hydro_3 | 8.0e-50 | 61 | 318 | 316 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 1.0e-61 | 32 | 703 | 778 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 22 | 738 | 762 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002285805.1 | 0 | 1 | 738 | 1 | 774 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002302284.1 | 0 | 1 | 738 | 1 | 742 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002302285.1 | 0 | 1 | 738 | 1 | 773 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002306583.1 | 0 | 1 | 738 | 1 | 745 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002513892.1 | 0 | 1 | 738 | 1 | 774 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 127 | 730 | 139 | 724 | A Chain A, Crystal Structure Of Yersinia Enterocolitica Salicylate Synthase (Irp9) |
PDB | 3u48_A | 0 | 127 | 730 | 139 | 724 | A Chain A, Crystal Structure Of Yersinia Enterocolitica Salicylate Synthase (Irp9) |
PDB | 3u4a_B | 0 | 127 | 730 | 139 | 724 | A Chain A, Crystal Structure Of Yersinia Enterocolitica Salicylate Synthase (Irp9) |
PDB | 3u4a_A | 0 | 127 | 730 | 139 | 724 | A Chain A, Crystal Structure Of Yersinia Enterocolitica Salicylate Synthase (Irp9) |
PDB | 2x41_A | 4e-31 | 51 | 736 | 2 | 698 | A Chain A, Crystal Structure Of Yersinia Enterocolitica Salicylate Synthase (Irp9) |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |