Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.002G145700.1 |
Family | CE8 |
Protein Properties | Length: 390 Molecular Weight: 43314 Isoelectric Point: 10.0338 |
Chromosome | Chromosome/Scaffold: 02 Start: 10864335 End: 10865955 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 75 | 374 | 0 |
YVVAQDGSGTHKTINDALAALDKTGGNRRNQRVIVYVKAGVYNEKVVIKKNMEKLMFVGDGIDRTIVTGNRNAKRDGYATHETATFGVHADGFWARDMTF ENTAGPDGRQAVALMVSSEQSVVYRCSFKGYQNTLYVRSKRQFYRDCHIYGTIDFIFGNAAVVLQNCDIFVRKPNENQKNVIVAQGRKGPDENTGISIQG SRIRPAPDFIGVKNIPTFLGRPWRKYSRTVIFETDIDGFIDPAGWLPWDGSVHLNTLFYAEYNNIGCGASTEHRAKWPGFHVFKSWKEASPFTVNKFIKG |
Full Sequence |
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Protein Sequence Length: 390 Download |
MSSASTATIF LLLAIAATTT FCHQELEKSE NFRTQTDQAS EALAFNVKSG KGLKRRKPNG 60 KLLTSWNPAN SKADYVVAQD GSGTHKTIND ALAALDKTGG NRRNQRVIVY VKAGVYNEKV 120 VIKKNMEKLM FVGDGIDRTI VTGNRNAKRD GYATHETATF GVHADGFWAR DMTFENTAGP 180 DGRQAVALMV SSEQSVVYRC SFKGYQNTLY VRSKRQFYRD CHIYGTIDFI FGNAAVVLQN 240 CDIFVRKPNE NQKNVIVAQG RKGPDENTGI SIQGSRIRPA PDFIGVKNIP TFLGRPWRKY 300 SRTVIFETDI DGFIDPAGWL PWDGSVHLNT LFYAEYNNIG CGASTEHRAK WPGFHVFKSW 360 KEASPFTVNK FIKGSSWISQ TGVSYKLGV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02468 | PLN02468 | 2.0e-131 | 58 | 388 | 331 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 6.0e-134 | 61 | 389 | 330 | + pectinesterase/pectinesterase inhibitor | ||
PLN02713 | PLN02713 | 2.0e-135 | 61 | 388 | 331 | + Probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 1.0e-166 | 74 | 375 | 303 | + Pectinesterase. | ||
PLN02916 | PLN02916 | 0 | 40 | 389 | 374 | + pectinesterase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_191632.2 | 0 | 48 | 389 | 179 | 519 | pectinesterase family protein [Arabidopsis thaliana] |
Swiss-Prot | Q84R10 | 0 | 48 | 389 | 179 | 519 | PME36_ARATH RecName: Full=Probable pectinesterase/pectinesterase inhibitor 36; Includes: RecName: Full=Pectinesterase inhibitor 36; AltName: Full=Pectin methylesterase inhibitor 36; Includes: RecName: Full=Pectinesterase 36; Short=PE 36; AltName: Full=Pectin methylesterase 36; Short=AtPME36; Flags: Precursor |
RefSeq | XP_002274478.1 | 0 | 33 | 389 | 120 | 485 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002301275.1 | 0 | 59 | 389 | 1 | 331 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002511680.1 | 0 | 21 | 389 | 101 | 472 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 76 | 389 | 10 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 73 | 389 | 3 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 6e-19 | 64 | 344 | 2 | 312 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 6e-19 | 64 | 344 | 2 | 312 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 6e-19 | 64 | 344 | 2 | 312 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |