| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.002G159300.1 |
| Family | GH14 |
| Protein Properties | Length: 708 Molecular Weight: 78932.1 Isoelectric Point: 5.2702 |
| Chromosome | Chromosome/Scaffold: 02 Start: 11958080 End: 11964970 |
| Description | beta-amylase 7 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 273 | 690 | 0 |
| YVMLPLGVINMKCELVDPDDLLKQLKVLKSANVDGIMVDCWWGIVEAHTPQEYNWSGYSRLFQMVRELKLKLQVVMSFHECGGNVGDDVCIPLPHWVAEI GRSNPDIFFTDREGRRNPECLSWGIDKERVLRGRTAVEVYFDYMRSFRAEFDECFADGIISMVEVGLGPCGELRYPSCPVKHGWRYPGIGEFQCYDQYLL KSLKKTAEARGHPFWARGPDNAGFYNSQPHETGFFCDGGDYDGYYGRFFLNWYTRILVDHGDRVLSLAKLAFEGTQIAVKLSGIHWWYKTASHAAELTAG FYNPCNRDGYAAIAEMLKKHKAALNFSCSESRMGDQQVDFAEALADPEGLVWQVLNAAWEVGIPIASENALPCHDRVTYNKILDNAKPLNDPDGKHFLSF THLRLSPLLMERQTFVEF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 708 Download |
| MATDIQKLIG TSEEDDDEEM DMDVKEEDDE DEENGGKNIA AQIMAGGGGG MASNNSDNQF 60 QHQQQFQEQV TTPAGGARRS RPLEEKERTK LRERHRRAIT ARILAGLRRH GNYNLRVRAD 120 INDVIAALAR EAGWVVLPDG TTFPSRSQVL ISQGSRPAGG TSAAVTSSSS HLVSQQTPPA 180 SLRGVSPGYQ TSVEYSTCSM KGVFMPNPSP YDLSASTQPQ IPAVVGEGGE QTESNLHIGG 240 SMDIINDKQI VDIPPIPKLP ERDFAGTPFI PVYVMLPLGV INMKCELVDP DDLLKQLKVL 300 KSANVDGIMV DCWWGIVEAH TPQEYNWSGY SRLFQMVREL KLKLQVVMSF HECGGNVGDD 360 VCIPLPHWVA EIGRSNPDIF FTDREGRRNP ECLSWGIDKE RVLRGRTAVE VYFDYMRSFR 420 AEFDECFADG IISMVEVGLG PCGELRYPSC PVKHGWRYPG IGEFQCYDQY LLKSLKKTAE 480 ARGHPFWARG PDNAGFYNSQ PHETGFFCDG GDYDGYYGRF FLNWYTRILV DHGDRVLSLA 540 KLAFEGTQIA VKLSGIHWWY KTASHAAELT AGFYNPCNRD GYAAIAEMLK KHKAALNFSC 600 SESRMGDQQV DFAEALADPE GLVWQVLNAA WEVGIPIASE NALPCHDRVT YNKILDNAKP 660 LNDPDGKHFL SFTHLRLSPL LMERQTFVEF ERFVKRMHGE AVVELRV* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00197 | PLN00197 | 6.0e-144 | 270 | 697 | 436 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 9.0e-158 | 270 | 697 | 432 | + beta-amylase | ||
| PLN02905 | PLN02905 | 0 | 1 | 707 | 709 | + beta-amylase | ||
| PLN02705 | PLN02705 | 0 | 98 | 700 | 614 | + beta-amylase | ||
| PLN02801 | PLN02801 | 0 | 269 | 700 | 438 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAE99337.1 | 0 | 1 | 703 | 1 | 681 | putative beta-amylase [Arabidopsis thaliana] |
| EMBL | CBI40368.1 | 0 | 44 | 707 | 1 | 657 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_182112.2 | 0 | 1 | 703 | 1 | 681 | BAM7 (BETA-AMYLASE 7); beta-amylase/ catalytic/ cation binding [Arabidopsis thaliana] |
| RefSeq | XP_002273843.1 | 0 | 1 | 707 | 1 | 699 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002511857.1 | 0 | 1 | 707 | 4 | 704 | Beta-amylase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1wdr_A | 0 | 269 | 700 | 11 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
| PDB | 1byd_A | 0 | 269 | 700 | 11 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
| PDB | 1byc_A | 0 | 269 | 700 | 11 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
| PDB | 1byb_A | 0 | 269 | 700 | 11 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
| PDB | 1bya_A | 0 | 269 | 700 | 11 | 444 | A Chain A, Crystal Structures Of Soybean Beta-Amylase Reacted With Beta-Maltose And Maltal: Active Site Components And Their Apparent Role In Catalysis |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DV021150 | 292 | 355 | 646 | 0 |
| JG638376 | 267 | 278 | 544 | 0 |
| DT587209 | 255 | 286 | 540 | 0 |
| GO367915 | 286 | 281 | 566 | 0 |
| CO447286 | 289 | 347 | 635 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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