| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.002G159300.2 |
| Family | GH14 |
| Protein Properties | Length: 562 Molecular Weight: 62393.3 Isoelectric Point: 5.0475 |
| Chromosome | Chromosome/Scaffold: 02 Start: 11958080 End: 11964970 |
| Description | beta-amylase 7 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 268 | 549 | 0 |
| YVMLPLGVINMKCELVDPDDLLKQLKVLKSANVDGIMVDCWWGIVEAHTPQEYNWSGYSRLFQMVRELKLKLQVVMSFHECGGNVGDDVCIPLPHWVAEI GRSNPDIFFTDREGRRNPECLSWGIDKERVLRGRTAVEVYFDYMRSFRAEFDECFADGIISMVEVGLGPCGELRYPSCPVKHGWRYPGIGEFQCYDQYLL KSLKKTAEARGHPFWARGPDNAGFYNSQPHETGFFCDGGDYDGYYGRFFLNWYTRILVDHGDRVLSLAKLAFEGTQIAVKVF | |||
| Full Sequence |
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| Protein Sequence Length: 562 Download |
| MATDIQKLIG TSEEDDDEEM DMDVKEEDDE DEENGGKNIA AQIMAGGGGG MASNNSDNQF 60 QHQQQFQEQV TTPAGGARRS RPLEEKERTK LRERHRRAIT ARILAGLRRH GNYNLRVRAD 120 INDVIAALAR EAGWVVLPDG TTFPSRSQGS RPAGGTSAAV TSSSSHLVSQ QTPPASLRGV 180 SPGYQTSVEY STCSMKGVFM PNPSPYDLSA STQPQIPAVV GEGGEQTESN LHIGGSMDII 240 NDKQIVDIPP IPKLPERDFA GTPFIPVYVM LPLGVINMKC ELVDPDDLLK QLKVLKSANV 300 DGIMVDCWWG IVEAHTPQEY NWSGYSRLFQ MVRELKLKLQ VVMSFHECGG NVGDDVCIPL 360 PHWVAEIGRS NPDIFFTDRE GRRNPECLSW GIDKERVLRG RTAVEVYFDY MRSFRAEFDE 420 CFADGIISMV EVGLGPCGEL RYPSCPVKHG WRYPGIGEFQ CYDQYLLKSL KKTAEARGHP 480 FWARGPDNAG FYNSQPHETG FFCDGGDYDG YYGRFFLNWY TRILVDHGDR VLSLAKLAFE 540 GTQIAVKVFI GGTRQPVMLL N* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00197 | PLN00197 | 9.0e-99 | 265 | 552 | 291 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 1.0e-112 | 265 | 542 | 280 | + beta-amylase | ||
| PLN02801 | PLN02801 | 2.0e-121 | 264 | 548 | 287 | + beta-amylase | ||
| PLN02905 | PLN02905 | 0 | 1 | 548 | 550 | + beta-amylase | ||
| PLN02705 | PLN02705 | 0 | 98 | 548 | 462 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAC28536.1 | 0 | 1 | 548 | 1 | 531 | putative beta-amylase [Arabidopsis thaliana] |
| EMBL | CBI40368.1 | 0 | 44 | 548 | 1 | 503 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_182112.2 | 0 | 1 | 548 | 1 | 531 | BAM7 (BETA-AMYLASE 7); beta-amylase/ catalytic/ cation binding [Arabidopsis thaliana] |
| RefSeq | XP_002273843.1 | 0 | 1 | 548 | 1 | 545 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002511857.1 | 0 | 1 | 548 | 4 | 550 | Beta-amylase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1wds_A | 0 | 264 | 554 | 11 | 300 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta- Amylase |
| PDB | 1wdr_A | 0 | 264 | 554 | 11 | 300 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
| PDB | 1wdp_A | 0 | 264 | 554 | 11 | 300 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
| PDB | 1v3i_A | 0 | 264 | 554 | 11 | 300 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
| PDB | 1q6g_A | 0 | 264 | 554 | 11 | 300 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (N340t) With Increased Ph Optimum |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| JG638376 | 267 | 273 | 539 | 0 |
| DT587209 | 255 | 281 | 535 | 0 |
| BU877914 | 231 | 331 | 561 | 0 |
| HO064443 | 238 | 253 | 490 | 0 |
| EH764943 | 254 | 243 | 496 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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