| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.002G159300.6 |
| Family | GH14 |
| Protein Properties | Length: 375 Molecular Weight: 42560.2 Isoelectric Point: 6.0512 |
| Chromosome | Chromosome/Scaffold: 02 Start: 11958081 End: 11962386 |
| Description | beta-amylase 2 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 12 | 357 | 0 |
| QVVMSFHECGGNVGDDVCIPLPHWVAEIGRSNPDIFFTDREGRRNPECLSWGIDKERVLRGRTAVEVYFDYMRSFRAEFDECFADGIISMVEVGLGPCGE LRYPSCPVKHGWRYPGIGEFQCYDQYLLKSLKKTAEARGHPFWARGPDNAGFYNSQPHETGFFCDGGDYDGYYGRFFLNWYTRILVDHGDRVLSLAKLAF EGTQIAVKLSGIHWWYKTASHAAELTAGFYNPCNRDGYAAIAEMLKKHKAALNFSCSESRMGDQQVDFAEALADPEGLVWQVLNAAWEVGIPIASENALP CHDRVTYNKILDNAKPLNDPDGKHFLSFTHLRLSPLLMERQTFVEF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 375 Download |
| MRSTCFTDFL PQVVMSFHEC GGNVGDDVCI PLPHWVAEIG RSNPDIFFTD REGRRNPECL 60 SWGIDKERVL RGRTAVEVYF DYMRSFRAEF DECFADGIIS MVEVGLGPCG ELRYPSCPVK 120 HGWRYPGIGE FQCYDQYLLK SLKKTAEARG HPFWARGPDN AGFYNSQPHE TGFFCDGGDY 180 DGYYGRFFLN WYTRILVDHG DRVLSLAKLA FEGTQIAVKL SGIHWWYKTA SHAAELTAGF 240 YNPCNRDGYA AIAEMLKKHK AALNFSCSES RMGDQQVDFA EALADPEGLV WQVLNAAWEV 300 GIPIASENAL PCHDRVTYNK ILDNAKPLND PDGKHFLSFT HLRLSPLLME RQTFVEFERF 360 VKRMHGEAVV ELRV* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00197 | PLN00197 | 1.0e-119 | 12 | 364 | 361 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 5.0e-130 | 12 | 364 | 357 | + beta-amylase | ||
| PLN02801 | PLN02801 | 1.0e-147 | 12 | 367 | 362 | + beta-amylase | ||
| PLN02905 | PLN02905 | 0 | 12 | 374 | 363 | + beta-amylase | ||
| PLN02705 | PLN02705 | 0 | 12 | 367 | 356 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI40368.1 | 0 | 12 | 374 | 295 | 657 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI40370.1 | 0 | 12 | 372 | 186 | 546 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002273843.1 | 0 | 12 | 374 | 337 | 699 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002274612.1 | 0 | 12 | 372 | 212 | 572 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002511857.1 | 0 | 12 | 374 | 342 | 704 | Beta-amylase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2xgi_A | 0 | 12 | 365 | 85 | 440 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (N340t) With Increased Ph Optimum |
| PDB | 2xgb_A | 0 | 12 | 365 | 85 | 440 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (N340t) With Increased Ph Optimum |
| PDB | 2xg9_A | 0 | 12 | 365 | 85 | 440 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (N340t) With Increased Ph Optimum |
| PDB | 2xfy_A | 0 | 12 | 365 | 85 | 440 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (N340t) With Increased Ph Optimum |
| PDB | 2xfr_A | 0 | 12 | 365 | 85 | 440 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (N340t) With Increased Ph Optimum |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
| Hydropathy |
|---|
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DV021150 | 292 | 22 | 313 | 0 |
| CO447286 | 289 | 14 | 302 | 0 |
| GE635393 | 252 | 98 | 349 | 0 |
| DT743402 | 262 | 114 | 375 | 0 |
| DV466053 | 277 | 97 | 373 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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