y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.002G197200.1 |
Family | GH3 |
Protein Properties | Length: 771 Molecular Weight: 82832.5 Isoelectric Point: 8.0646 |
Chromosome | Chromosome/Scaffold: 02 Start: 15787688 End: 15793426 |
Description | beta-xylosidase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 73 | 320 | 0 |
AAVPRLGIKGYEWWSEALHGVSNVGPGTQFGGAFPGATSFPQVITTAASFNATLWEAIGRVVSDEARAMFNGGVAGLTYWSPNVNIFRDPRWGRGQETPG EDPVVAGKYAASYVRGLQGNDGDRLKVAACCKHFTAYDLDNWNGVDRFHFNAQVSKQDMEDTFDVPFRMCVKEGKVASVMCSYNQVNGIPTCADPKLLKK TVRGQWKLDGYIVSDCDSVGVYYSQQHYTTTPEEAAADAIKAGLDLDC |
Full Sequence |
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Protein Sequence Length: 771 Download |
MPASLVFILL VLFLGVSLQT SEALDPFACD PEDGTSRNFP FCQVKLPIQS RVSDLIGRMT 60 LQEKVGLLVN DAAAVPRLGI KGYEWWSEAL HGVSNVGPGT QFGGAFPGAT SFPQVITTAA 120 SFNATLWEAI GRVVSDEARA MFNGGVAGLT YWSPNVNIFR DPRWGRGQET PGEDPVVAGK 180 YAASYVRGLQ GNDGDRLKVA ACCKHFTAYD LDNWNGVDRF HFNAQVSKQD MEDTFDVPFR 240 MCVKEGKVAS VMCSYNQVNG IPTCADPKLL KKTVRGQWKL DGYIVSDCDS VGVYYSQQHY 300 TTTPEEAAAD AIKAGLDLDC GPFLGQHTED AVRKGLLTEA EINNALLNTL TVQMRLGMFD 360 GEPSSKPYGN LGPKDVCTPA HQELALEAAR QGIVLLKNHG PPLPLSTRHH QSVAIIGPNS 420 NVTVTMIGNY AGVACGYTTP LQGIGRYAKT IYQQGCADVA CVSDQQFVAA MDAARQADAT 480 VLVMGLDQSI EAESRDRTEL LLPGRQQELI SKVAAASKGP TILVLMSGGP IDVSFAENDP 540 KIGGIVWAGY PGQAGGAAIS DVLFGTTNPG GKLPMTWYPQ DYVTNLPMTN MAMRPSKSNG 600 YPGRTYRFYK GKVVYPFGHG ISYTNFVHTI ASAPTMVSVP LVGHRQASRN ATISGKAIRV 660 THARCNRLSF GVQVDVKNTG SMDGTHTLLV YSKPPAGHWA PLKQLVAFEK VHVAAGTQQR 720 VGINVHVCKF LSVVDRSGIR RIPMGAHSLH IGDVKHSVSL QASILGVIKS * 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 4.0e-55 | 393 | 624 | 240 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 9.0e-60 | 70 | 456 | 392 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 1.0e-67 | 60 | 352 | 322 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 1.0e-81 | 40 | 721 | 772 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 27 | 762 | 754 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAG10624.1 | 0 | 5 | 770 | 1 | 763 | AC022521_2 Similar to xylosidase [Arabidopsis thaliana] |
RefSeq | NP_563659.1 | 0 | 5 | 770 | 6 | 768 | BXL2 (BETA-XYLOSIDASE 2); hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | XP_002270249.1 | 0 | 2 | 770 | 7 | 768 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002316021.1 | 0 | 22 | 764 | 23 | 763 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515300.1 | 0 | 20 | 770 | 21 | 768 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 110 | 725 | 91 | 696 | A Chain A, Sugar Tongs Mutant S378p In Complex With Acarbose |
PDB | 3u48_A | 0 | 110 | 725 | 91 | 696 | A Chain A, Sugar Tongs Mutant S378p In Complex With Acarbose |
PDB | 3u4a_B | 0 | 110 | 725 | 91 | 696 | A Chain A, Sugar Tongs Mutant S378p In Complex With Acarbose |
PDB | 3u4a_A | 0 | 110 | 725 | 91 | 696 | A Chain A, Sugar Tongs Mutant S378p In Complex With Acarbose |
PDB | 2x41_A | 0 | 50 | 764 | 2 | 711 | A Chain A, Sugar Tongs Mutant S378p In Complex With Acarbose |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |