Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.002G202400.1 |
Family | GH9 |
Protein Properties | Length: 521 Molecular Weight: 57729.6 Isoelectric Point: 8.904 |
Chromosome | Chromosome/Scaffold: 02 Start: 16423855 End: 16426202 |
Description | glycosyl hydrolase 9B13 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 47 | 502 | 0 |
NYRDALTKSILFFEGQRSGKLPSSQRMTWRRDSGLTDGSTMHVDLVGGYYDAGDNVKFGFPMAFTTTMLSWSVLEFGGLMKGELQNAREAIRWATDYLLK ATAHTDTIYVQVGNANKDHACWERPEDMDTPRSVFKVDKHSPGSDVAAETAAALAAASLVFRRCDPTYAKLLVRRAIRVFQFADKYRGAYSNGLKRFVCP FYCSYSGYEDELLWGAAWLHKATKNPTYLNYIQVNGQNLGAAQFDNTFGWDNKHVGARILLSKAFLVQKLQSLHDYKGHADNFICSLIPGAPFSSAQYTP GGLLFKMSDSNMQYVTSTSFLLLTYAKYLTSARTVVNCGGTVVTPKRLRTIAKKQVDYLLGDNPLKMSYMVGYGPRYPQRIHHRGSSLPSIATHPGKIQC TSGFSVMNSQSPNPNVLVGAIVGGPDEHDRFPDERSDYEQSEPATYINAPLVGALA |
Full Sequence |
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Protein Sequence Length: 521 Download |
MACANFSFTF LVLCSCFATS FIACHGFPVH HNNPFHHRRH PRFASHNYRD ALTKSILFFE 60 GQRSGKLPSS QRMTWRRDSG LTDGSTMHVD LVGGYYDAGD NVKFGFPMAF TTTMLSWSVL 120 EFGGLMKGEL QNAREAIRWA TDYLLKATAH TDTIYVQVGN ANKDHACWER PEDMDTPRSV 180 FKVDKHSPGS DVAAETAAAL AAASLVFRRC DPTYAKLLVR RAIRVFQFAD KYRGAYSNGL 240 KRFVCPFYCS YSGYEDELLW GAAWLHKATK NPTYLNYIQV NGQNLGAAQF DNTFGWDNKH 300 VGARILLSKA FLVQKLQSLH DYKGHADNFI CSLIPGAPFS SAQYTPGGLL FKMSDSNMQY 360 VTSTSFLLLT YAKYLTSART VVNCGGTVVT PKRLRTIAKK QVDYLLGDNP LKMSYMVGYG 420 PRYPQRIHHR GSSLPSIATH PGKIQCTSGF SVMNSQSPNP NVLVGAIVGG PDEHDRFPDE 480 RSDYEQSEPA TYINAPLVGA LAYLAHSSGQ LEVLAASPIC * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02266 | PLN02266 | 0 | 2 | 511 | 510 | + endoglucanase | ||
PLN02308 | PLN02308 | 0 | 44 | 508 | 466 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 0 | 47 | 502 | 463 | + Glycosyl hydrolase family 9. | ||
PLN03009 | PLN03009 | 0 | 44 | 509 | 469 | + cellulase | ||
PLN02175 | PLN02175 | 0 | 44 | 505 | 463 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAA80495.1 | 0 | 34 | 511 | 33 | 510 | endo-1,4-beta-glucanase precursor [Solanum lycopersicum] |
RefSeq | XP_002271736.1 | 0 | 17 | 511 | 25 | 511 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002301487.1 | 0 | 1 | 520 | 1 | 520 | glycosyl hydrolase family 9 [Populus trichocarpa] |
RefSeq | XP_002320998.1 | 0 | 1 | 511 | 1 | 510 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523114.1 | 0 | 25 | 511 | 23 | 510 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 45 | 504 | 2 | 428 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
PDB | 1ksc_A | 0 | 45 | 504 | 2 | 428 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
PDB | 1ks8_A | 0 | 45 | 504 | 2 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 47 | 509 | 5 | 445 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 47 | 509 | 5 | 445 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |