Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.002G202400.2 |
Family | GH9 |
Protein Properties | Length: 437 Molecular Weight: 48122.7 Isoelectric Point: 8.4968 |
Chromosome | Chromosome/Scaffold: 02 Start: 16423855 End: 16425850 |
Description | glycosyl hydrolase 9B13 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 5 | 418 | 0 |
VDLVGGYYDAGDNVKFGFPMAFTTTMLSWSVLEFGGLMKGELQNAREAIRWATDYLLKATAHTDTIYVQVGNANKDHACWERPEDMDTPRSVFKVDKHSP GSDVAAETAAALAAASLVFRRCDPTYAKLLVRRAIRVFQFADKYRGAYSNGLKRFVCPFYCSYSGYEDELLWGAAWLHKATKNPTYLNYIQVNGQNLGAA QFDNTFGWDNKHVGARILLSKAFLVQKLQSLHDYKGHADNFICSLIPGAPFSSAQYTPGGLLFKMSDSNMQYVTSTSFLLLTYAKYLTSARTVVNCGGTV VTPKRLRTIAKKQVDYLLGDNPLKMSYMVGYGPRYPQRIHHRGSSLPSIATHPGKIQCTSGFSVMNSQSPNPNVLVGAIVGGPDEHDRFPDERSDYEQSE PATYINAPLVGALA |
Full Sequence |
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Protein Sequence Length: 437 Download |
MTMQVDLVGG YYDAGDNVKF GFPMAFTTTM LSWSVLEFGG LMKGELQNAR EAIRWATDYL 60 LKATAHTDTI YVQVGNANKD HACWERPEDM DTPRSVFKVD KHSPGSDVAA ETAAALAAAS 120 LVFRRCDPTY AKLLVRRAIR VFQFADKYRG AYSNGLKRFV CPFYCSYSGY EDELLWGAAW 180 LHKATKNPTY LNYIQVNGQN LGAAQFDNTF GWDNKHVGAR ILLSKAFLVQ KLQSLHDYKG 240 HADNFICSLI PGAPFSSAQY TPGGLLFKMS DSNMQYVTST SFLLLTYAKY LTSARTVVNC 300 GGTVVTPKRL RTIAKKQVDY LLGDNPLKMS YMVGYGPRYP QRIHHRGSSL PSIATHPGKI 360 QCTSGFSVMN SQSPNPNVLV GAIVGGPDEH DRFPDERSDY EQSEPATYIN APLVGALAYL 420 AHSSGQLEVL AASPIC* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02266 | PLN02266 | 0 | 2 | 427 | 426 | + endoglucanase | ||
PLN02308 | PLN02308 | 0 | 2 | 424 | 424 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 0 | 5 | 418 | 421 | + Glycosyl hydrolase family 9. | ||
PLN03009 | PLN03009 | 0 | 2 | 425 | 427 | + cellulase | ||
PLN02175 | PLN02175 | 0 | 4 | 421 | 419 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI36884.1 | 0 | 3 | 427 | 15 | 439 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002271736.1 | 0 | 3 | 427 | 87 | 511 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002301487.1 | 0 | 2 | 436 | 86 | 520 | glycosyl hydrolase family 9 [Populus trichocarpa] |
RefSeq | XP_002320998.1 | 0 | 3 | 427 | 86 | 510 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523114.1 | 0 | 3 | 427 | 86 | 510 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 6 | 420 | 47 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 1ksc_A | 0 | 6 | 420 | 47 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 1ks8_A | 0 | 6 | 420 | 47 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 5 | 425 | 47 | 445 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 5 | 425 | 47 | 445 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
ES791832 | 308 | 120 | 427 | 0 |
EV243304 | 295 | 141 | 435 | 0 |
CO125126 | 285 | 3 | 287 | 0 |
EX293604 | 285 | 143 | 423 | 0 |
DT336843 | 296 | 2 | 297 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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