Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.002G202500.1 |
Family | CE8 |
Protein Properties | Length: 559 Molecular Weight: 61950 Isoelectric Point: 9.9888 |
Chromosome | Chromosome/Scaffold: 02 Start: 16448852 End: 16453134 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 247 | 542 | 0 |
LIVAKDGTGNFTTISEAVRAAPNSSDTRFVIHIKAGAYFENVEVERKKKMLVFIGDGIGKTVVKANRSVVDGWTTFRSATVAVVGDGFIAKGITFENSAG PSKHQAVALRSGSDLSAFYQCSFVGYQDTLYVHTLRQFYRECDIYGTIDFIFGNAAVVFQNSNLYARKPNSNQKNIFTAQGREDPNQNTGISILNCKVAA AADLIPVKSSFQTFLGRPWKEYSRTVFLRSYIDDLVDPAGWLEWNASFALSTLYYREYMNRGPGSNTSARVTWPGYRIITNSTEASQFTVGAFIQG |
Full Sequence |
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Protein Sequence Length: 559 Download |
MYPTRGRTKH LLFLLPISIL VITLLSFKRP AKFSSKTIEI PRLHIHKHIQ IAHSACKGTL 60 YPELCVSTLV SLPDLASKSL QEFISATLNK TMDEVRASSA DCNAIRNKMK LGPLEKVALK 120 DCIELFDDTI AELKSAISNL ALRKPTSKHY HDLQTLLSGA MTNQYTCLDG FARSKGKVRK 180 AIKKGLYNIS HHVSNSLAML KKIPGVNASK SEVFPEYGNV KHGFPSWLST KDRKLLQASA 240 NATKFDLIVA KDGTGNFTTI SEAVRAAPNS SDTRFVIHIK AGAYFENVEV ERKKKMLVFI 300 GDGIGKTVVK ANRSVVDGWT TFRSATVAVV GDGFIAKGIT FENSAGPSKH QAVALRSGSD 360 LSAFYQCSFV GYQDTLYVHT LRQFYRECDI YGTIDFIFGN AAVVFQNSNL YARKPNSNQK 420 NIFTAQGRED PNQNTGISIL NCKVAAAADL IPVKSSFQTF LGRPWKEYSR TVFLRSYIDD 480 LVDPAGWLEW NASFALSTLY YREYMNRGPG SNTSARVTWP GYRIITNSTE ASQFTVGAFI 540 QGNTWLNSTD IPYFLNLN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02933 | PLN02933 | 0 | 77 | 557 | 491 | + Probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 246 | 543 | 298 | + Pectinesterase. | ||
PLN02301 | PLN02301 | 0 | 20 | 553 | 541 | + pectinesterase/pectinesterase inhibitor | ||
PLN02484 | PLN02484 | 0 | 3 | 558 | 569 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02713 | PLN02713 | 0 | 54 | 558 | 533 | + Probable pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACQ85264.1 | 0 | 42 | 558 | 45 | 565 | pectin methylesterase [Musa acuminata AAA Group] |
EMBL | CBI36883.1 | 0 | 7 | 532 | 17 | 499 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002271665.1 | 0 | 1 | 557 | 1 | 563 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002301486.1 | 0 | 109 | 558 | 1 | 450 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523113.1 | 0 | 39 | 558 | 36 | 557 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 246 | 557 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 248 | 557 | 6 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 4e-23 | 242 | 487 | 1 | 279 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 4e-23 | 242 | 487 | 1 | 279 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 4e-23 | 242 | 487 | 1 | 279 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |