| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.002G202500.3 |
| Family | CE8 |
| Protein Properties | Length: 395 Molecular Weight: 43901.1 Isoelectric Point: 10.3448 |
| Chromosome | Chromosome/Scaffold: 02 Start: 16451677 End: 16453134 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 247 | 331 | 3.4e-26 |
| LIVAKDGTGNFTTISEAVRAAPNSSDTRFVIHIKAGAYFENVEVERKKKMLVFIGDGIGKTVVKANRSVVDGWTTFRSATVGESK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 395 Download |
| MYPTRGRTKH LLFLLPISIL VITLLSFKRP AKFSSKTIEI PRLHIHKHIQ IAHSACKGTL 60 YPELCVSTLV SLPDLASKSL QEFISATLNK TMDEVRASSA DCNAIRNKMK LGPLEKVALK 120 DCIELFDDTI AELKSAISNL ALRKPTSKHY HDLQTLLSGA MTNQYTCLDG FARSKGKVRK 180 AIKKGLYNIS HHVSNSLAML KKIPGVNASK SEVFPEYGNV KHGFPSWLST KDRKLLQASA 240 NATKFDLIVA KDGTGNFTTI SEAVRAAPNS SDTRFVIHIK AGAYFENVEV ERKKKMLVFI 300 GDGIGKTVVK ANRSVVDGWT TFRSATVGES KFSFFFLQYL KLFMFHMVIG EVNGDHAAPF 360 RFFHYLLVNH DHCQIRTLAT TVTGGAMYTR DSKL* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02201 | PLN02201 | 5.0e-56 | 64 | 334 | 288 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 3.0e-58 | 20 | 327 | 315 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02484 | PLN02484 | 9.0e-59 | 3 | 361 | 377 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02313 | PLN02313 | 5.0e-70 | 51 | 328 | 300 | + Pectinesterase/pectinesterase inhibitor | ||
| PLN02933 | PLN02933 | 3.0e-85 | 2 | 361 | 379 | + Probable pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACQ85264.1 | 0 | 42 | 327 | 45 | 334 | pectin methylesterase [Musa acuminata AAA Group] |
| EMBL | CBI36883.1 | 0 | 7 | 328 | 17 | 332 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002271665.1 | 0 | 1 | 327 | 1 | 333 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002301486.1 | 0 | 109 | 327 | 1 | 219 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002523113.1 | 0 | 39 | 327 | 36 | 326 | Pectinesterase-3 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 8e-22 | 246 | 327 | 8 | 89 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 1e-19 | 246 | 338 | 4 | 95 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3uw0_A | 0.001 | 238 | 327 | 24 | 117 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
