Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.002G202600.1 |
Family | CE8 |
Protein Properties | Length: 559 Molecular Weight: 61445.3 Isoelectric Point: 8.5626 |
Chromosome | Chromosome/Scaffold: 02 Start: 16482738 End: 16484667 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 245 | 540 | 0 |
VTVRQDGQGNFTTINDAIAAAPNKTDGSNGYFMIYVTAGIYEEYVSIAKNKRYLMMVGDGINQTVITGNRSVVDGWTTFNSATFAVVGQNFVAVNITFRN TAGAVKHQAVALRSGADLSTFYSCSFEGYQDTLYTHSLRQFYRDCDIYGTVDFIFGNAAVVFQNCNLYPRLPMSGQFNAITAQGRKDPNQNTGTSIHNCN IAAADDLASSNMTVQTYLGRPWKEYSRTVYMQSSMDTSINPAGWQIWNGDFALNTSYYAEYNNTGPGSDTTNRVTWPGFHVINATDAANFTVSGFL |
Full Sequence |
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Protein Sequence Length: 559 Download |
MASKLISLLV IAAVLPFFSS PSLANVSPSS LVSPGTLCND TPDPSYCKSV LPKQSTNVYD 60 SARLCVRKSL SQSRTFLNLV DKYLLRRSSL SITATRALED CRFLANLNIE FLLSSFQTVN 120 ATSKTLPALK ADDVQTLLSA ILTNQETCLD GLQATSSAWS VRNGLSVPLS DDAKLYSVSL 180 AFFTKGWVPK MKKRITWQPK SKQLAFRHGR LPFKMSARNH AIYESVSRRK LLQAENNDVE 240 VSDIVTVRQD GQGNFTTIND AIAAAPNKTD GSNGYFMIYV TAGIYEEYVS IAKNKRYLMM 300 VGDGINQTVI TGNRSVVDGW TTFNSATFAV VGQNFVAVNI TFRNTAGAVK HQAVALRSGA 360 DLSTFYSCSF EGYQDTLYTH SLRQFYRDCD IYGTVDFIFG NAAVVFQNCN LYPRLPMSGQ 420 FNAITAQGRK DPNQNTGTSI HNCNIAAADD LASSNMTVQT YLGRPWKEYS RTVYMQSSMD 480 TSINPAGWQI WNGDFALNTS YYAEYNNTGP GSDTTNRVTW PGFHVINATD AANFTVSGFL 540 LGNEWLPQTA VPFSSDLI* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02468 | PLN02468 | 2.0e-153 | 97 | 557 | 463 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 2.0e-156 | 36 | 557 | 531 | + pectinesterase/pectinesterase inhibitor | ||
PLN02713 | PLN02713 | 0 | 1 | 558 | 565 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN03043 | PLN03043 | 0 | 38 | 558 | 543 | + Probable pectinesterase/pectinesterase inhibitor; Provisional | ||
pfam01095 | Pectinesterase | 0 | 245 | 543 | 300 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_563662.1 | 0 | 7 | 558 | 3 | 578 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002268492.1 | 0 | 36 | 554 | 34 | 552 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002302726.1 | 0 | 1 | 558 | 1 | 558 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002320332.1 | 0 | 25 | 558 | 27 | 560 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523112.1 | 0 | 1 | 558 | 1 | 566 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 245 | 557 | 9 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 247 | 557 | 7 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 2e-23 | 250 | 512 | 14 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 2e-23 | 250 | 512 | 14 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 2e-23 | 250 | 512 | 14 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |