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Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.002G238600.1 |
Family | GT1 |
Protein Properties | Length: 561 Molecular Weight: 62033 Isoelectric Point: 7.2039 |
Chromosome | Chromosome/Scaffold: 02 Start: 23153114 End: 23162082 |
Description | UDP-Glycosyltransferase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT1 | 158 | 540 | 0 |
VGTRGDVQPFIAIGKRLQDYGHRVRLATHSNFKEFVETAGLEFFPLGGDPKVLAGYMVKNKGFLPSGPSEISVQRNQIKEIIYSLLPACKEPDIDSGIPF KADAIIANPPAYGHTHVAEALKVPLHIFFTMPWTPTSEFPHPLSRVKQPAGYRLSYQIVDSLIWLGIRDMINDLRKKKLKLRPVTYLSGSQGSDSDVPHG YLWSPHLVPKPKDWGANIDVVGFCFLDLASNYEPPESLLKWLEAGQKPIYIGFGSLPVEEPEKMTQTIVEAVEQTGQRGIINKGWGGLGNLAEPKDFIYL LDNCPHDWLFLQCKAVVHHGGAGTTAAGLKAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSRTKLIDAIIFMLDPKS |
Full Sequence |
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Protein Sequence Length: 561 Download |
MAESRRRSSS SSSFSSVRIE GEIGVGDESE SREAAGVASV SNRIRGGDTT TEPTPSQLSK 60 LERSKTKTKG QRHQNILPEE AAQICNDKIP VRQKRKLLRR IASVKHDGTV EFEVPGDVEP 120 QAPGVGYDDV YNTVVDDEPL DATDLQYIPP LQIVMLIVGT RGDVQPFIAI GKRLQDYGHR 180 VRLATHSNFK EFVETAGLEF FPLGGDPKVL AGYMVKNKGF LPSGPSEISV QRNQIKEIIY 240 SLLPACKEPD IDSGIPFKAD AIIANPPAYG HTHVAEALKV PLHIFFTMPW TPTSEFPHPL 300 SRVKQPAGYR LSYQIVDSLI WLGIRDMIND LRKKKLKLRP VTYLSGSQGS DSDVPHGYLW 360 SPHLVPKPKD WGANIDVVGF CFLDLASNYE PPESLLKWLE AGQKPIYIGF GSLPVEEPEK 420 MTQTIVEAVE QTGQRGIINK GWGGLGNLAE PKDFIYLLDN CPHDWLFLQC KAVVHHGGAG 480 TTAAGLKAAC PTTIVPFFGD QPFWGERVHA RGVGPPPIPV DEFSRTKLID AIIFMLDPKS 540 RSVPWISLRP WRMRMVPLEQ * 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1819 | COG1819 | 7.0e-30 | 153 | 540 | 394 | + Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | ||
pfam03033 | Glyco_transf_28 | 1.0e-35 | 153 | 297 | 145 | + Glycosyltransferase family 28 N-terminal domain. The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). This N-terminal domain contains the acceptor binding site and likely membrane association site. This family also contains a large number of proteins that probably have quite distinct activities. | ||
cd03784 | GT1_Gtf_like | 9.0e-114 | 153 | 541 | 389 | + This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
Gene Ontology | |
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GO Term | Description |
GO:0005975 | carbohydrate metabolic process |
GO:0008152 | metabolic process |
GO:0016758 | transferase activity, transferring hexosyl groups |
GO:0030259 | lipid glycosylation |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI37267.1 | 0 | 1 | 543 | 1 | 564 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002265023.1 | 0 | 1 | 543 | 48 | 611 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002301763.1 | 0 | 60 | 541 | 1 | 482 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321244.1 | 0 | 47 | 541 | 6 | 496 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002521125.1 | 0 | 15 | 543 | 21 | 575 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3h4t_A | 2e-28 | 151 | 514 | 1 | 329 | A Chain A, Rhamnogalacturonan Lyase From Aspergillus Aculeatus Mutant H210a |
PDB | 3h4i_A | 2e-28 | 151 | 514 | 1 | 329 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
PDB | 1rrv_B | 2e-21 | 151 | 542 | 1 | 374 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
PDB | 1rrv_A | 2e-21 | 151 | 542 | 1 | 374 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
PDB | 1iir_A | 9e-17 | 395 | 514 | 230 | 346 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GT046352 | 335 | 160 | 494 | 0 |
GO883166 | 334 | 113 | 446 | 0 |
DY295142 | 411 | 52 | 462 | 0 |
CX664063 | 292 | 250 | 541 | 0 |
GT046352 | 26 | 487 | 512 | 0.001 |
Sequence Alignments (This image is cropped. Click for full image.) |
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