| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.002G247800.1 |
| Family | CBM43 |
| Protein Properties | Length: 466 Molecular Weight: 51533.2 Isoelectric Point: 9.5733 |
| Chromosome | Chromosome/Scaffold: 02 Start: 23848583 End: 23851011 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM43 | 376 | 459 | 1.4e-27 |
| WCIVAKEANRSAVKDALAWACSQGNTTCDEIQPGKGCYKPVSLFWHASYAFSSYWAEFKKIGGVCSFNGLATTTVKDPSFGQCK | |||
| GH17 | 27 | 348 | 0 |
| VGINYGQLGNNLPSPSRSVELIKSLKAKRVKIYDANPDILKSLKNTDIQVSIMVPNALIPNISKSQYFSDQWVKTNVVPYYSDVKIRYLLVGNEILTNPD TGTWFNLVPAMRRIKISLTRHNIRKIKVGTPSAINVLESSFPPSNGTFRPDISGTVIKPMLQFLNRTKSFFFIDFYPFFAWSENAHNISLDYALFNAQNV TYTDPGTNLTYTNLFDQMFDAVVFAMKRLGYPGIRVFIAETGWPNGGDFEQLGANIYNSATYNRNVVKKLTTIPAIGTPAQPGVVIPAFIFSLYNENQKP GPGTERQFGLYYPNGTEVFEID | |||
| Full Sequence |
|---|
| Protein Sequence Length: 466 Download |
| MGPVAAIHVF IFALLISISG AVISSEVGIN YGQLGNNLPS PSRSVELIKS LKAKRVKIYD 60 ANPDILKSLK NTDIQVSIMV PNALIPNISK SQYFSDQWVK TNVVPYYSDV KIRYLLVGNE 120 ILTNPDTGTW FNLVPAMRRI KISLTRHNIR KIKVGTPSAI NVLESSFPPS NGTFRPDISG 180 TVIKPMLQFL NRTKSFFFID FYPFFAWSEN AHNISLDYAL FNAQNVTYTD PGTNLTYTNL 240 FDQMFDAVVF AMKRLGYPGI RVFIAETGWP NGGDFEQLGA NIYNSATYNR NVVKKLTTIP 300 AIGTPAQPGV VIPAFIFSLY NENQKPGPGT ERQFGLYYPN GTEVFEIDLS GKTPLSGYKK 360 PLPLPTNNEP YKGKLWCIVA KEANRSAVKD ALAWACSQGN TTCDEIQPGK GCYKPVSLFW 420 HASYAFSSYW AEFKKIGGVC SFNGLATTTV KDPSFGQCKF PSVTL* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 9.0e-18 | 375 | 447 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 3.0e-33 | 375 | 460 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 9.0e-104 | 27 | 348 | 323 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAA89481.1 | 0 | 1 | 465 | 10 | 478 | beta-1,3-glucanase [Salix gilgiana] |
| EMBL | CBI39470.1 | 0 | 1 | 465 | 3 | 467 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002303070.1 | 0 | 14 | 465 | 10 | 461 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002334812.1 | 0 | 7 | 465 | 7 | 465 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002534357.1 | 0 | 79 | 465 | 1 | 387 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 27 | 349 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghs_B | 0 | 27 | 349 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 27 | 349 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3f55_D | 0 | 26 | 350 | 1 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3f55_C | 0 | 26 | 350 | 1 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
