Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.002G256200.2 |
Family | GT47 |
Protein Properties | Length: 599 Molecular Weight: 68003.9 Isoelectric Point: 7.707 |
Chromosome | Chromosome/Scaffold: 02 Start: 24549266 End: 24551998 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 138 | 478 | 0 |
GGRYIYVHDLPSRFNEDMLKECRSLSLWTNMCKFTTNAGMGPPLENVEGVFSNTGWYATNQFAVDVIFSNRMKQYECLTNDSSVAAAIFVPFYAGFDIAR YLWGHNVSRRDAASLDLVDWLMKRPEWGIMQGRDHFLVAGRITWDFRRLTDEESDWGNKLLFLPAAKNMSMLVVESSPWNANDFGIPYPTYFHPAKDADV FTWQDRMRKLERKWLFSFAGAPRPDNPKSIRGQIIDQCKKSKVGKLLECDFGESKCHSPSSIMQMFQSSLFCLQPQGDSYTRRSAFDSMLAGCIPVFFHP GSAYTQYTWHLPKNYTTYSVFIPEDDIRKRNVSIEERLSQI |
Full Sequence |
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Protein Sequence Length: 599 Download |
MRRRSPTNVS SELMEKGGGK NQHNRLCLLA SLSAFFWILL LYFHFVVLAG STVDKSVKLD 60 PTQLNPESKT PAFVTDNRLP DNPLKSSPST SETIPSNATP SSTETTPLKT TSTSSQKIEK 120 FPFTRALRTV ENKSDPCGGR YIYVHDLPSR FNEDMLKECR SLSLWTNMCK FTTNAGMGPP 180 LENVEGVFSN TGWYATNQFA VDVIFSNRMK QYECLTNDSS VAAAIFVPFY AGFDIARYLW 240 GHNVSRRDAA SLDLVDWLMK RPEWGIMQGR DHFLVAGRIT WDFRRLTDEE SDWGNKLLFL 300 PAAKNMSMLV VESSPWNAND FGIPYPTYFH PAKDADVFTW QDRMRKLERK WLFSFAGAPR 360 PDNPKSIRGQ IIDQCKKSKV GKLLECDFGE SKCHSPSSIM QMFQSSLFCL QPQGDSYTRR 420 SAFDSMLAGC IPVFFHPGSA YTQYTWHLPK NYTTYSVFIP EDDIRKRNVS IEERLSQISP 480 EQVKIMRDNV INLIPSLIYA DPRSKLETLK DAFDVAVQAV IDKVTRLRKN IIEGRTEYDN 540 FVEENSWKYA LLDEGQREVG GHEWDPFFSK PKDGNADSGG SSAEAAKNSW ENERRGQS* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 2.0e-70 | 136 | 478 | 358 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD21751.1 | 0 | 14 | 598 | 1 | 599 | unknown protein [Arabidopsis thaliana] |
GenBank | ACY08857.1 | 0 | 1 | 598 | 1 | 617 | xyloglucan galactosyltransferase [Eucalyptus grandis] |
DDBJ | BAE98519.1 | 0 | 1 | 598 | 7 | 618 | hypothetical protein [Arabidopsis thaliana] |
RefSeq | NP_179627.2 | 0 | 1 | 598 | 7 | 618 | MUR3 (MURUS 3); catalytic/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002301846.1 | 0 | 14 | 598 | 1 | 585 | glycosyltransferase, CAZy family GT47 [Populus trichocarpa] |