CAZyme Information

Basic Information
SpeciesPopulus trichocarpa
Cazyme IDPotri.002G259700.1
FamilyAA3
Protein PropertiesLength: 519 Molecular Weight: 56340.7 Isoelectric Point: 6.8461
ChromosomeChromosome/Scaffold: 02 Start: 24814870 End: 24817475
DescriptionLong-chain fatty alcohol dehydrogenase family protein
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
AA31625156.1e-25
  VKCDVVVVGSGCGGGIAASALASSGKKVLVLDKGNYSVPEDYSSLEGPSMSELYESGGFLSAVDGETMILAGSTVGGGSAVNWSACIKTPDSVLGEWSVD
  HMIPLYGSPEYQYAMDAVCKRIGVTEHCAEKGFQNQILRRGCQKLGLKVGFVPRNCTEDHYCGSCCYECRTGEKKGTDSTWRYPPVRGHFPEHISCLEGK
  VSEGGIVTSMHKAVSAEPKHTSILETPSIGPASFAAACPWTSGLDFMDRMALRKALRILIAAGAVKVGTYRSDGQRLVCEGIKKDLEEFLDTIRIPGGLR
  SREENWTILFSAHQMGSCTVGATAEEGGVDQNGESWAAENLFVCDRSVLPSALG
Full Sequence
Protein Sequence     Length: 519     Download
MEQNQNCHPL LRGGNRKVLS NAYGHGFSSG QMQSLDAFCE TLIPPLPVPS FSEEIPVDKQ    60
EAIRSFYKAS GSQSPVAELM VKSGVPEAVL FVRLVLKFLS CRLGTLLLCG FICLDWKWPL    120
IHKFSEISAE RREEILRKWS RQQYLTPLRV VFVVIKLMCM YVKCDVVVVG SGCGGGIAAS    180
ALASSGKKVL VLDKGNYSVP EDYSSLEGPS MSELYESGGF LSAVDGETMI LAGSTVGGGS    240
AVNWSACIKT PDSVLGEWSV DHMIPLYGSP EYQYAMDAVC KRIGVTEHCA EKGFQNQILR    300
RGCQKLGLKV GFVPRNCTED HYCGSCCYEC RTGEKKGTDS TWRYPPVRGH FPEHISCLEG    360
KVSEGGIVTS MHKAVSAEPK HTSILETPSI GPASFAAACP WTSGLDFMDR MALRKALRIL    420
IAAGAVKVGT YRSDGQRLVC EGIKKDLEEF LDTIRIPGGL RSREENWTIL FSAHQMGSCT    480
VGATAEEGGV DQNGESWAAE NLFVCDRSVL PSALGSIP* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
COG2303BetA1.0e-547251847+
pfam05199GMC_oxred_C8.0e-847251544+
pfam00732GMC_oxred_N5.0e-52211348139+
Gene Ontology
GO TermDescription
GO:0009055electron carrier activity
GO:0016491oxidoreductase activity
GO:0016614oxidoreductase activity, acting on CH-OH group of donors
GO:0050660flavin adenine dinucleotide binding
GO:0055114oxidation-reduction process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
EMBLCAP15763.10160342234417long chain fatty alcohol oxidase FAO2 [Lotus japonicus]
EMBLCBI37146.10851813562unnamed protein product [Vitis vinifera]
RefSeqXP_002529832.1011621164electron carrier, putative [Ricinus communis]
RefSeqXP_002529832.10162342237417electron carrier, putative [Ricinus communis]
RefSeqXP_002529832.10349518511722electron carrier, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB1kdg_B0.0011653429201A Chain A, Crystal Structure Of The Flavin Domain Of Cellobiose Dehydrogenase
PDB1kdg_A0.0011653429201A Chain A, Crystal Structure Of The Flavin Domain Of Cellobiose Dehydrogenase
PDB1naa_B0.0011653424196A Chain A, Cellobiose Dehydrogenase Flavoprotein Fragment In Complex With Cellobionolactam
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
ES5888521811623420
FN7530671611873470
BQ1065481531873390
EY6594161611873470
FN753067503473950.039
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_089_00009.1Aquca_049_00132.1Aquca_034_00307.1Aquca_034_00304.1
Arabidopsis lyrata914728491906479855470376
Arabidopsis thalianaAT4G19380.1AT4G28570.1AT3G23410.1AT1G03990.1
Brachypodium distachyonBradi3g28677.1Bradi3g28657.1Bradi3g49085.1
Brassica rapaBra012548Bra024190Bra013391Bra015283Bra001912
Bra014947
Carica papayaevm.model.supercontig_165.33evm.model.supercontig_44.31evm.model.supercontig_2124.1
Capsella rubellaCarubv10004418mCarubv10004208mCarubv10012453mCarubv10004212mCarubv10013046m
Citrus clementinaCiclev10011111mCiclev10004403mCiclev10004405mCiclev10018992m
Citrus sinensisorange1.1g003990morange1.1g004496m
Cucumis sativusCucsa.037200.2Cucsa.037200.1Cucsa.035240.1Cucsa.255570.1
Eucalyptus grandisEucgr.H03017.2Eucgr.H03017.1Eucgr.H00753.1Eucgr.K02114.1Eucgr.D02566.1
Eucgr.D02568.1
Fragaria vescamrna08288.1-v1.0-hybridmrna11513.1-v1.0-hybridmrna08285.1-v1.0-hybrid
Glycine maxGlyma09g35210.2Glyma01g35620.1Glyma16g16415.1Glyma16g08300.2Glyma10g32640.2
Glyma12g15940.1Glyma19g34960.1Glyma06g42400.2Glyma03g32220.2
Gossypium raimondiiGorai.001G179800.3Gorai.001G179800.2Gorai.001G179800.1Gorai.011G177100.3Gorai.011G177100.2
Gorai.011G177100.1Gorai.006G252500.1
Linum usitatissimumLus10003621Lus10024922Lus10035673Lus10008239Lus10022903
Lus10037257Lus10011800
Malus domesticaMDP0000233110MDP0000173300MDP0000208936MDP0000197715
Manihot esculentacassava4.1_004067mcassava4.1_002349mcassava4.1_002619mcassava4.1_002379mcassava4.1_025870m
Medicago truncatulaMedtr5g025650.1Medtr8g072210.1Medtr4g081080.1Medtr1g075650.1Medtr4g080890.1
Mimulus guttatusmgv1a001761mmgv1a022390mmgv1a001868mmgv1a001883mmgv1a001896m
Oryza sativaLOC_Os10g33540.1LOC_Os10g33520.1LOC_Os10g33460.1LOC_Os02g40840.1
Panicum virgatumPavirv00054947m
Physcomitrella patensPp1s58_61V6.1Pp1s7_216V6.1Pp1s48_250V6.1Pp1s2_413V6.1
Phaseolus vulgarisPhvul.002G122600.1Phvul.003G278200.1Phvul.007G124200.1Phvul.001G162800.1Phvul.011G136600.1
Picea abiesMA_10427118g0010MA_9032943g0010MA_9483g0010MA_10427421g0010MA_242814g0010
Populus trichocarpaPotri.004G234900.2Potri.004G234900.1Potri.010G069100.1Potri.008G169300.1
Prunus persicappa014756mppa018458mppa021498m
Ricinus communis29827.m00265529981.m00058628492.m000467
Setaria italicaSi034362mSi034354mSi034359mSi016380m
Selaginella moellendorffii1140891168557460173531
Sorghum bicolorSb01g019470.1Sb01g019460.1Sb01g019480.1Sb04g026370.1Sb04g026390.1
Thellungiella halophilaThhalv10024717mThhalv10024496mThhalv10024528mThhalv10020141mThhalv10006882m
Vitis viniferaGSVIVT01036891001GSVIVT01027855001GSVIVT01028371001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)