Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.002G259700.1 |
Family | AA3 |
Protein Properties | Length: 519 Molecular Weight: 56340.7 Isoelectric Point: 6.8461 |
Chromosome | Chromosome/Scaffold: 02 Start: 24814870 End: 24817475 |
Description | Long-chain fatty alcohol dehydrogenase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA3 | 162 | 515 | 6.1e-25 |
VKCDVVVVGSGCGGGIAASALASSGKKVLVLDKGNYSVPEDYSSLEGPSMSELYESGGFLSAVDGETMILAGSTVGGGSAVNWSACIKTPDSVLGEWSVD HMIPLYGSPEYQYAMDAVCKRIGVTEHCAEKGFQNQILRRGCQKLGLKVGFVPRNCTEDHYCGSCCYECRTGEKKGTDSTWRYPPVRGHFPEHISCLEGK VSEGGIVTSMHKAVSAEPKHTSILETPSIGPASFAAACPWTSGLDFMDRMALRKALRILIAAGAVKVGTYRSDGQRLVCEGIKKDLEEFLDTIRIPGGLR SREENWTILFSAHQMGSCTVGATAEEGGVDQNGESWAAENLFVCDRSVLPSALG |
Full Sequence |
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Protein Sequence Length: 519 Download |
MEQNQNCHPL LRGGNRKVLS NAYGHGFSSG QMQSLDAFCE TLIPPLPVPS FSEEIPVDKQ 60 EAIRSFYKAS GSQSPVAELM VKSGVPEAVL FVRLVLKFLS CRLGTLLLCG FICLDWKWPL 120 IHKFSEISAE RREEILRKWS RQQYLTPLRV VFVVIKLMCM YVKCDVVVVG SGCGGGIAAS 180 ALASSGKKVL VLDKGNYSVP EDYSSLEGPS MSELYESGGF LSAVDGETMI LAGSTVGGGS 240 AVNWSACIKT PDSVLGEWSV DHMIPLYGSP EYQYAMDAVC KRIGVTEHCA EKGFQNQILR 300 RGCQKLGLKV GFVPRNCTED HYCGSCCYEC RTGEKKGTDS TWRYPPVRGH FPEHISCLEG 360 KVSEGGIVTS MHKAVSAEPK HTSILETPSI GPASFAAACP WTSGLDFMDR MALRKALRIL 420 IAAGAVKVGT YRSDGQRLVC EGIKKDLEEF LDTIRIPGGL RSREENWTIL FSAHQMGSCT 480 VGATAEEGGV DQNGESWAAE NLFVCDRSVL PSALGSIP* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG2303 | BetA | 1.0e-5 | 472 | 518 | 47 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
pfam05199 | GMC_oxred_C | 8.0e-8 | 472 | 515 | 44 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
pfam00732 | GMC_oxred_N | 5.0e-52 | 211 | 348 | 139 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. |
Gene Ontology | |
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GO Term | Description |
GO:0009055 | electron carrier activity |
GO:0016491 | oxidoreductase activity |
GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
GO:0050660 | flavin adenine dinucleotide binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAP15763.1 | 0 | 160 | 342 | 234 | 417 | long chain fatty alcohol oxidase FAO2 [Lotus japonicus] |
EMBL | CBI37146.1 | 0 | 8 | 518 | 13 | 562 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002529832.1 | 0 | 1 | 162 | 1 | 164 | electron carrier, putative [Ricinus communis] |
RefSeq | XP_002529832.1 | 0 | 162 | 342 | 237 | 417 | electron carrier, putative [Ricinus communis] |
RefSeq | XP_002529832.1 | 0 | 349 | 518 | 511 | 722 | electron carrier, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1kdg_B | 0.001 | 165 | 342 | 9 | 201 | A Chain A, Crystal Structure Of The Flavin Domain Of Cellobiose Dehydrogenase |
PDB | 1kdg_A | 0.001 | 165 | 342 | 9 | 201 | A Chain A, Crystal Structure Of The Flavin Domain Of Cellobiose Dehydrogenase |
PDB | 1naa_B | 0.001 | 165 | 342 | 4 | 196 | A Chain A, Cellobiose Dehydrogenase Flavoprotein Fragment In Complex With Cellobionolactam |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
ES588852 | 181 | 162 | 342 | 0 |
FN753067 | 161 | 187 | 347 | 0 |
BQ106548 | 153 | 187 | 339 | 0 |
EY659416 | 161 | 187 | 347 | 0 |
FN753067 | 50 | 347 | 395 | 0.039 |
Sequence Alignments (This image is cropped. Click for full image.) |
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