| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.003G002100.1 |
| Family | CE8 |
| Protein Properties | Length: 495 Molecular Weight: 54375.2 Isoelectric Point: 9.5131 |
| Chromosome | Chromosome/Scaffold: 03 Start: 253600 End: 255167 |
| Description | pectin methylesterase 3 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 183 | 478 | 0 |
| DVVVAADGSGKYRTVSAAVAAAPKHSAKRYIIKIKAGVYRENVEVPSEKTNIMFLGDGRKKTIITASRNVVDGGTTYHSATVAVVGQGFLARDITFQNTA GASKYQAVALRVESDFAAFYKCGMLAYQNTLYVHSNRQFFTNCYIAGTVDFIFGNSAAVFQDCDIHARRPNPGQTITITAQGRSDPNQNTGIVIQKSRIG ATADLQHARSNFSAYLGRPWKEYSRTVIMQSSISDVISPAGWREWKGRFALNTLHFAEYENSGVGAGTAGRVPWKGYKVITDATEAQAFTARNFIT | |||
| Full Sequence |
|---|
| Protein Sequence Length: 495 Download |
| SGDDPKTVIL NNINKTIDAI NSKKIRDDKI LSTEDLTAQQ KTALKDCRQN YDSSLADLDN 60 VWGELNRNPN KKKLQQKSYA AELQTKVSSC ISGQQSCLDG FSHSWLSRLF RKALGPSEDN 120 AGKMCSNALA LINKLIEDTD AIANRLKTTS RKLMEEDDSD EGWPEWLSVT DRRLFQSSLL 180 TPDVVVAADG SGKYRTVSAA VAAAPKHSAK RYIIKIKAGV YRENVEVPSE KTNIMFLGDG 240 RKKTIITASR NVVDGGTTYH SATVAVVGQG FLARDITFQN TAGASKYQAV ALRVESDFAA 300 FYKCGMLAYQ NTLYVHSNRQ FFTNCYIAGT VDFIFGNSAA VFQDCDIHAR RPNPGQTITI 360 TAQGRSDPNQ NTGIVIQKSR IGATADLQHA RSNFSAYLGR PWKEYSRTVI MQSSISDVIS 420 PAGWREWKGR FALNTLHFAE YENSGVGAGT AGRVPWKGYK VITDATEAQA FTARNFITGS 480 SWLKSTTFPF SLGL* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PLN02468 | PLN02468 | 5.0e-139 | 8 | 494 | 492 | + putative pectinesterase/pectinesterase inhibitor |
| PLN02201 | PLN02201 | 5.0e-144 | 43 | 494 | 454 | + probable pectinesterase/pectinesterase inhibitor |
| PLN02301 | PLN02301 | 6.0e-150 | 38 | 494 | 459 | + pectinesterase/pectinesterase inhibitor |
| PLN02313 | PLN02313 | 0 | 6 | 494 | 501 | + Pectinesterase/pectinesterase inhibitor |
| pfam01095 | Pectinesterase | 0 | 183 | 480 | 298 | + Pectinesterase. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAC18726.1 | 0 | 4 | 494 | 83 | 574 | putative pectin methylesterase [Populus tremula x Populus tremuloides] |
| EMBL | CAC18727.1 | 0 | 4 | 494 | 45 | 536 | putative pectin methylesterase [Populus tremula x Populus tremuloides] |
| RefSeq | XP_002331120.1 | 0 | 1 | 494 | 70 | 563 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002331121.1 | 0 | 1 | 494 | 78 | 572 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002331123.1 | 0 | 2 | 494 | 80 | 573 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 176 | 494 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 180 | 494 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 5e-25 | 184 | 469 | 7 | 327 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 5e-25 | 184 | 469 | 7 | 327 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 8e-25 | 184 | 469 | 7 | 327 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Hydropathy |
|---|
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CV262571 | 227 | 269 | 495 | 0 |
| HO786780 | 285 | 211 | 495 | 0 |
| CV267349 | 228 | 268 | 495 | 0 |
| CO096907 | 278 | 218 | 495 | 0 |
| GW327299 | 281 | 211 | 491 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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