| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.003G003400.1 |
| Family | GH116 |
| Protein Properties | Length: 971 Molecular Weight: 108468 Isoelectric Point: 6.0837 |
| Chromosome | Chromosome/Scaffold: 03 Start: 329521 End: 338396 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH116 | 525 | 886 | 0 |
| GQFLYLEGIEYHMWNTYDVHFYASFAFIMLFPKLQLSIQRDFAAAVMMHDPSMMPLLHDGQRVPRKVIGAVPHDIGIHDPWFEVNAYNLHNTDRWKDLNP KFVLQVYRDVIATGDKKFARAVWPSVYVAMAYMDQFDRDGDGMIENDGFPDQTYDTWSLSGVSAYCGGLWVAALQAASALAWEVGDKDSAEYFWCRFQKA KIVYGKLWNGSYFNYDNSGSINSSSIQADQLAGQWYARACGLSPIVDEDKARCALEKIYNYNVLKVQDGKRGAVNGMLPDGTVDLSCLQSREIWSGVTYA VAATMIQEGLTDMAFHTASGVYEAVWAEQGLGYSFQTPEGWNTTDQYRSLCYMRPLAIWAMQ | |||
| Full Sequence |
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| Protein Sequence Length: 971 Download |
| MFERKISGNG FDEEQGEPSN YPVDKVDAGK PAPLTWQRKL DGGETVLSQF TLSLQEKLLM 60 APIGIRLWRH IREENARKRG GFYMDPFAKR NVTSCLGIPV GGIGSGSIGR SYKGEFQRWQ 120 LFPRICEEKP VLANQFSIFV SRSNGKKYSS VLCSRSPDVL EEAAGSGIES WDWNLKGNNS 180 TYHALYPRAW TVYEGEPDPE LRVVCRQISP IIPHNYKESS FPASVFTFKL YNSGKTSADV 240 TLLFTWANSV GGVSEFSGQH LNSTKMMEDG VHCALLNHKT ANGLPSVSFA IAAQETPVVH 300 VSKCPCFVIS GNSQGVTAKE MWNEVKEHGS FDNLNSPGKL VPSEPGSSIG AAVAATSTVP 360 PDGVCTVTFS LAWDCPDVKF GSGRTYHRRY TKFYGTHGDA AANIAHDAIL EHGLWESEIE 420 AWQRPILEDK RLPEWYAGTL FNELYYLNSG GTVWTDGSPP FRSLATIEGS KFSLDRAGSN 480 LGHQGDTAVD ILGRMTSALE EIHTPLTTNS AFGTNLLQEG EENIGQFLYL EGIEYHMWNT 540 YDVHFYASFA FIMLFPKLQL SIQRDFAAAV MMHDPSMMPL LHDGQRVPRK VIGAVPHDIG 600 IHDPWFEVNA YNLHNTDRWK DLNPKFVLQV YRDVIATGDK KFARAVWPSV YVAMAYMDQF 660 DRDGDGMIEN DGFPDQTYDT WSLSGVSAYC GGLWVAALQA ASALAWEVGD KDSAEYFWCR 720 FQKAKIVYGK LWNGSYFNYD NSGSINSSSI QADQLAGQWY ARACGLSPIV DEDKARCALE 780 KIYNYNVLKV QDGKRGAVNG MLPDGTVDLS CLQSREIWSG VTYAVAATMI QEGLTDMAFH 840 TASGVYEAVW AEQGLGYSFQ TPEGWNTTDQ YRSLCYMRPL AIWAMQWALS RPELHRQEMK 900 LQAEEDSVPV HHAGFAKVAR FLKLPHAESS KSHFQSLFEY ATNKFGYTHT HTHTHTHIDF 960 RFQFDDFFLS * 1020 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam12215 | GBA2_N | 7.0e-56 | 115 | 408 | 306 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
| COG4354 | COG4354 | 1.0e-67 | 524 | 889 | 384 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam04685 | DUF608 | 2.0e-164 | 525 | 887 | 368 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI31319.1 | 0 | 7 | 945 | 3 | 947 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002264575.1 | 0 | 9 | 945 | 4 | 947 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002328722.1 | 0 | 25 | 945 | 1 | 922 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002331126.1 | 0 | 1 | 948 | 1 | 948 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528846.1 | 0 | 1 | 948 | 1 | 952 | conserved hypothetical protein [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| JG703027 | 328 | 543 | 870 | 0 |
| CK110603 | 285 | 600 | 884 | 0 |
| DY292040 | 374 | 538 | 907 | 0 |
| DY669443 | 302 | 346 | 639 | 0 |
| GT176060 | 350 | 439 | 782 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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