y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.003G021300.1 |
Family | CE8 |
Protein Properties | Length: 557 Molecular Weight: 60703 Isoelectric Point: 9.5105 |
Chromosome | Chromosome/Scaffold: 03 Start: 2550013 End: 2551810 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 244 | 539 | 0 |
AVVAQDGSGQFKTISAALAAYPKNLKGRYVIYVKAGTYREYVAVAKDQPNVFIYGDGSRKTIVTGNKSFAKDGLGTWKTATFIVEANGFIAKSIGFTNTA GPDGHQAVAIRANSDMSAFYNCRFDGYQDTVLYQAGRQFYRNCVLSGTVDFLFGYGSAVIQNSLIIVRRPNPNQFNTVTADGRKERGQPGGVVIHNCRIV PEQKLVPDRLKIKTYLGRPWKAYSRTVVMESKLADFIQPDGWAPWSGNEFLDTLYYAEYANAGPGAATNRRVRWKTLHFLKRSEALQFTVGTFLQG |
Full Sequence |
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Protein Sequence Length: 557 Download |
MLGKVIVSGV SLILVVGVII GVVVTVNRSN GSNDTESLSP QMKAVSALCQ PTYYKEACTN 60 TLSALNSTDP KELIKGGILA ISASLKNSFN VTDDLVAKTD NASRDKMALN DCKELLQNAS 120 ESLEDTLSKV GEIDLLSLSN RTDDFRTWLS SIIGYQEMCL DGFENGSSLR DQVQKSTDYG 180 SELTDNVLNI LAGLSQVLNS LGLKLNIPST SRQLLQADGF PTWMSASDRK LLASRGNGGV 240 RPNAVVAQDG SGQFKTISAA LAAYPKNLKG RYVIYVKAGT YREYVAVAKD QPNVFIYGDG 300 SRKTIVTGNK SFAKDGLGTW KTATFIVEAN GFIAKSIGFT NTAGPDGHQA VAIRANSDMS 360 AFYNCRFDGY QDTVLYQAGR QFYRNCVLSG TVDFLFGYGS AVIQNSLIIV RRPNPNQFNT 420 VTADGRKERG QPGGVVIHNC RIVPEQKLVP DRLKIKTYLG RPWKAYSRTV VMESKLADFI 480 QPDGWAPWSG NEFLDTLYYA EYANAGPGAA TNRRVRWKTL HFLKRSEALQ FTVGTFLQGG 540 QWIKNNGIPV LMGLRK* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02197 | PLN02197 | 1.0e-152 | 26 | 554 | 572 | + pectinesterase | ||
PLN02468 | PLN02468 | 6.0e-153 | 27 | 554 | 536 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02314 | PLN02314 | 5.0e-156 | 25 | 549 | 542 | + pectinesterase | ||
pfam01095 | Pectinesterase | 6.0e-168 | 243 | 539 | 298 | + Pectinesterase. | ||
PLN02745 | PLN02745 | 0 | 27 | 554 | 542 | + Putative pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002298185.1 | 0 | 28 | 556 | 28 | 558 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002298186.1 | 0 | 29 | 556 | 32 | 559 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002303172.1 | 0 | 29 | 556 | 33 | 560 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002304074.1 | 0 | 28 | 556 | 28 | 556 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002528620.1 | 0 | 28 | 556 | 28 | 557 | Pectinesterase-4 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 240 | 554 | 5 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 243 | 554 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 2e-18 | 243 | 542 | 5 | 337 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 2e-18 | 243 | 542 | 5 | 337 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 5e-18 | 243 | 542 | 5 | 337 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |