CAZyme Information

Basic Information
SpeciesPopulus trichocarpa
Cazyme IDPotri.003G025800.1
FamilyCBM57
Protein PropertiesLength: 1000 Molecular Weight: 109644 Isoelectric Point: 5.4961
ChromosomeChromosome/Scaffold: 03 Start: 3088692 End: 3100423
DescriptionLeucine-rich repeat transmembrane protein kinase
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
CBM573885662.6e-26
  INCGGSSETVDDNEYEDDTTPGGAADFASISERWGYSSTGTYIGTDNGAYKATNSFGLNVTGEGFYQTARLAPQSLKYYGLCMLAGSYKVQLHFAEIMYS
  NNQTFSSLGRRIFDISIQGKVVEANFNIMEEAGGVGIGITKVFDGIIVNGSTLEIHLYWSGKGTTAVPERGVYGPLISA
Full Sequence
Protein Sequence     Length: 1000     Download
MALWPPLLSK TFSVLVFGFV VLNCIAVDKF GSNAQEVTPL LPLDEVRLNI RNWATINRTS    60
CDSAQWKING NEIESNVTCN CTFENGSVCH VTRIRVKRFN LNGVLPEELG DLPHLLEIDL    120
TRNYISGTIP PRLAQLPKLQ ILSLIVNRLT GPIPPEIGNI TTLEELVLED NLLGGPLPPD    180
LGNLTSLRRL LLSANNFTGT IPDTFGNLKN LNDFRIDGSE VSGKIPDFIG NWTNITTLDL    240
HGTSMEGPIP SAISLLKKLT ILILRNCSLT GSIQEYLGNM ADLDTLDLSF NKLTGQIPGP    300
LESLKKNIKF MFLNNNLLTG EVPAWILGST KDLDLSYNNF NGSAEQSCQQ LPVNLVASHV    360
STGSNKISWC LNKDLVCTRK PQYHSLFINC GGSSETVDDN EYEDDTTPGG AADFASISER    420
WGYSSTGTYI GTDNGAYKAT NSFGLNVTGE GFYQTARLAP QSLKYYGLCM LAGSYKVQLH    480
FAEIMYSNNQ TFSSLGRRIF DISIQGKVVE ANFNIMEEAG GVGIGITKVF DGIIVNGSTL    540
EIHLYWSGKG TTAVPERGVY GPLISAITVT PNFKVDNGGG LSVGAIIGIV AAPCVLAALV    600
LLVLRKKGYL GGKDLEDKEL RALDLQTGYF SLRQIKHATN NFDPANKIGE GGFGPVYKGM    660
LSDGSVIAVK QLSAKSKQGN REFVNEIGMI SALQHPHLVK LYGCCIEGNQ LLLVYEYLEN    720
NSLARALFGR DEHQIKLDWQ TRKKILLGIA KGLTYLHEES RLKIVHRDIK ATNVLLDKDL    780
NAKISDFGLA KLDEEENTHI STRIAGTIGY MAPEYAMRGY LTDKADVYSF GVVVLEIVSG    840
KSNTNYRPKE EFVYLLDWAY VLQEQGNLLE LVDPSLGSNY SKIEALRMLN LALLCTNPSP    900
TLRPSMSSAV KMLEGQIPVQ APIVKRSTMN PDARFKAFEL LSHDSQTHVS NGSESSQIQK    960
SISMDGPWID SEFSIESKDE IIDSSSTKLL KDLYDVNLD* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd00180PKc2.0e-50648837194+
pfam11721Malectin6.0e-51384567187+
cd00192PTKc7.0e-52646914284+
smart00219TyrKc4.0e-52647913278+
smart00221STYKc1.0e-52647913278+
Gene Ontology
GO TermDescription
GO:0004672protein kinase activity
GO:0005515protein binding
GO:0005524ATP binding
GO:0006468protein phosphorylation
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
RefSeqXP_002283521.1029999191023PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002316847.10898071011predicted protein [Populus trichocarpa]
RefSeqXP_002331720.104799920936predicted protein [Populus trichocarpa]
RefSeqXP_002332762.1015699929872predicted protein [Populus trichocarpa]
RefSeqXP_002332763.109599937944predicted protein [Populus trichocarpa]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3ulz_A062691516308A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome
PDB3uim_A062691516308A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation
PDB3tl8_H062691524316B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector
PDB3tl8_G062691524316B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector
PDB3tl8_D062691524316B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector
Transmembrane Domains
StartEnd
582604
Signal Peptide
Cleavage Site
26
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
HO7977604473688130
FE6894492966139080
ES8162832956749680
DR9443542786279040
JG5924352746068780
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_039_00020.3Aquca_039_00020.2Aquca_039_00020.1Aquca_039_00021.1Aquca_039_00015.1
Aquca_039_00022.1Aquca_039_00018.1Aquca_039_00016.1Aquca_039_00019.1Aquca_055_00015.1
Aquca_012_00201.2Aquca_012_00201.1Aquca_039_00012.3Aquca_039_00012.2Aquca_039_00012.1
Arabidopsis lyrata474473474471881264473178866958
885138473176470791478899
Arabidopsis thalianaAT1G53440.1AT1G53430.2AT1G53430.1AT1G29720.1AT1G53420.1
AT1G29740.1AT1G07650.2AT1G07650.1AT1G29730.1AT1G29750.2
AT1G29750.1AT3G14840.2
Brachypodium distachyonBradi3g08917.2Bradi3g08917.1Bradi4g28367.1
Brassica rapaBra038124Bra010815Bra032332Bra030168Bra018693
Bra030169Bra027306Bra032331Bra030170Bra001566
Bra027307Bra030167Bra030174Bra027302Bra021579
Bra030161Bra030166Bra001567Bra010817Bra032333
Bra010816
Carica papayaevm.TU.contig_37590.1evm.model.supercontig_77.40evm.model.supercontig_77.35evm.model.supercontig_124.19evm.model.supercontig_124.16
Capsella rubellaCarubv10011641mCarubv10012061mCarubv10012394mCarubv10006720mCarubv10008178m
Carubv10008435mCarubv10011126mCarubv10012882mCarubv10008187mCarubv10011709m
Carubv10008366mCarubv10021813mCarubv10016637mCarubv10011128m
Citrus clementinaCiclev10018721mCiclev10018686mCiclev10024314mCiclev10018908mCiclev10019246m
Ciclev10018771mCiclev10014830mCiclev10014765mCiclev10014427mCiclev10014395m
Ciclev10014258mCiclev10014129mCiclev10014126mCiclev10014125mCiclev10024045m
Ciclev10023853mCiclev10020672mCiclev10020826m
Citrus sinensisorange1.1g004275morange1.1g001768morange1.1g001767morange1.1g043333morange1.1g045177m
orange1.1g040908morange1.1g006906morange1.1g005361morange1.1g003737morange1.1g003134m
orange1.1g002899morange1.1g002566morange1.1g046961morange1.1g023918morange1.1g045835m
orange1.1g040398morange1.1g027337m
Cucumis sativusCucsa.273550.2Cucsa.273550.1Cucsa.057870.1Cucsa.057860.1Cucsa.212760.1
Cucsa.185230.1Cucsa.057940.1Cucsa.057890.1Cucsa.057880.1
Eucalyptus grandisEucgr.F01301.1Eucgr.F01305.3Eucgr.F01305.2Eucgr.F01305.1Eucgr.F01302.1
Eucgr.F01306.1Eucgr.F04179.1Eucgr.F04177.1Eucgr.F04178.1Eucgr.B00978.1
Eucgr.B00894.1Eucgr.B00963.1Eucgr.B00960.1Eucgr.B00972.1Eucgr.F01359.1
Eucgr.K01762.1Eucgr.K01777.2Eucgr.K01777.1Eucgr.K01737.1Eucgr.F01312.2
Eucgr.F01312.1Eucgr.E04067.1Eucgr.F01308.1Eucgr.F04180.1Eucgr.K01781.2
Eucgr.K01781.1Eucgr.G01055.1Eucgr.K01793.1Eucgr.F01310.1Eucgr.F01353.1
Eucgr.A01951.2Eucgr.K01759.1Eucgr.K01987.1Eucgr.K01985.1Eucgr.F01307.1
Eucgr.K02000.1Eucgr.A01951.1Eucgr.F01314.1Eucgr.K01743.1Eucgr.F01361.2
Eucgr.F01361.1Eucgr.F01357.1Eucgr.F01330.1Eucgr.K01724.1Eucgr.K01771.1
Eucgr.F01362.1Eucgr.F01313.1Eucgr.D00419.1Eucgr.D00415.1Eucgr.E02844.1
Eucgr.E02839.1Eucgr.E02843.1Eucgr.E02842.1Eucgr.D00417.2Eucgr.D00417.1
Fragaria vescamrna27319.1-v1.0-hybridmrna27321.1-v1.0-hybridmrna27328.1-v1.0-hybridmrna27326.1-v1.0-hybridmrna19789.1-v1.0-hybrid
mrna27330.1-v1.0-hybridmrna34059.1-v1.0-hybridmrna27329.1-v1.0-hybridmrna24842.1-v1.0-hybrid.782.946mrna24842.1-v1.0-hybrid.782.946
mrna24842.1-v1.0-hybrid.782.946mrna28915.1-v1.0-hybridmrna23790.1-v1.0-hybridmrna24842.1-v1.0-hybrid.324.449mrna24842.1-v1.0-hybrid.324.449
mrna24842.1-v1.0-hybrid.324.449
Glycine maxGlyma12g25460.2Glyma06g31630.2Glyma13g34140.3Glyma13g34140.2Glyma12g36090.1
Glyma12g36161.2Glyma12g36161.1Glyma12g36190.1Glyma13g34090.2Glyma02g45800.1
Glyma12g36170.2Glyma13g34100.1Glyma14g02990.1Glyma13g34066.5Glyma13g34066.4
Glyma13g34066.3Glyma13g34066.2Glyma13g34066.1Glyma01g29330.2Glyma01g29378.2
Glyma01g29378.1Glyma01g29362.2Glyma01g29362.1Glyma13g29640.1Glyma05g29530.2
Gossypium raimondiiGorai.009G363600.1Gorai.002G049000.1Gorai.007G329800.1Gorai.007G330600.1Gorai.007G330300.1
Gorai.007G330700.1Gorai.009G159600.2Gorai.009G159600.1Gorai.007G330500.2Gorai.007G330500.1
Gorai.009G159500.2Gorai.009G159500.1Gorai.009G159400.2Gorai.009G159400.1Gorai.002G048900.2
Gorai.002G048900.1Gorai.002G048600.1Gorai.002G048300.2Gorai.002G048300.1Gorai.006G003800.1
Gorai.010G162700.2Gorai.010G162700.1Gorai.009G159800.6Gorai.002G048800.2Gorai.002G048800.1
Gorai.007G330000.2Gorai.007G330000.1Gorai.010G162800.6Gorai.010G162800.5Gorai.010G162800.4
Gorai.010G162800.3Gorai.010G162800.2Gorai.010G162800.1Gorai.010G163000.1Gorai.009G159800.5
Gorai.009G159800.4Gorai.009G159800.3Gorai.009G159800.2Gorai.009G159800.1
Linum usitatissimumLus10005550Lus10038153Lus10042505Lus10010951Lus10031374
Lus10005418Lus10015239
Malus domesticaMDP0000292097MDP0000263999MDP0000280824MDP0000164991MDP0000314346
MDP0000158644MDP0000196032MDP0000232699MDP0000554411MDP0000204873
MDP0000228140MDP0000195070MDP0000304817MDP0000305229MDP0000197297
MDP0000222736MDP0000228029MDP0000212352MDP0000163412MDP0000207132
MDP0000199384MDP0000845743
Manihot esculentacassava4.1_002090mcassava4.1_000803mcassava4.1_031464mcassava4.1_001160mcassava4.1_001028m
cassava4.1_001039mcassava4.1_000765mcassava4.1_003034mcassava4.1_001048mcassava4.1_000840m
cassava4.1_024552mcassava4.1_025472mcassava4.1_025223mcassava4.1_030745mcassava4.1_004308m
cassava4.1_002534mcassava4.1_031454m
Medicago truncatulaMedtr8g058250.1Medtr2g075250.1Medtr2g075060.1Medtr2g075140.1Medtr2g074980.1
Medtr2g074990.1Medtr2g074840.1Medtr5g083910.1Medtr5g091950.1Medtr2g074880.1
Medtr8g057890.1Medtr8g057900.1Medtr8g087740.1
Mimulus guttatusmgv1a026921mmgv1a000913mmgv1a025582m
Oryza sativaLOC_Os09g17630.1LOC_Os02g13850.1
Panicum virgatumPavirv00034171m
Phaseolus vulgarisPhvul.005G079100.1Phvul.011G167800.1Phvul.005G077900.1Phvul.005G077600.1Phvul.005G077400.1
Phvul.005G078900.1Phvul.005G078500.1Phvul.011G067400.1Phvul.005G078400.1Phvul.008G264400.1
Phvul.005G078100.1Phvul.005G078600.1Phvul.006G170500.2Phvul.006G170500.1Phvul.002G242600.1
Populus trichocarpaPotri.001G385600.1Potri.001G385900.3Potri.001G385900.2Potri.001G385900.1Potri.003G026300.1
Potri.011G106400.1Potri.001G386300.3Potri.001G386300.2Potri.001G386300.1Potri.003G025600.1
Potri.001G385400.1Potri.001G385300.2Potri.001G385300.1Potri.001G386500.1Potri.019G009700.1
Potri.019G006000.1Potri.019G009500.1Potri.019G009800.2Potri.019G009800.1Potri.019G005700.1
Potri.019G008900.1Potri.019G005900.6Potri.019G005900.5Potri.019G005900.4Potri.019G005900.3
Potri.019G005900.2Potri.019G005900.1Potri.001G385200.3Potri.001G385200.2Potri.001G385200.1
Potri.019G005300.2Potri.019G005300.1Potri.016G061500.4Potri.016G061500.3Potri.016G061500.2
Potri.016G061500.1Potri.019G007900.1Potri.001G384700.1Potri.019G005000.2Potri.019G005000.1
Potri.T033300.1Potri.T010200.1Potri.001G308600.2Potri.001G308600.1Potri.004G135500.2
Potri.004G135500.1Potri.011G075300.1Potri.T008400.1Potri.T032500.4Potri.T032500.3
Potri.T032500.2Potri.T032500.1Potri.T008300.1Potri.011G073700.2Potri.011G073700.1
Potri.019G004800.1Potri.019G004600.1Potri.019G005200.2Potri.019G005200.1Potri.001G385500.1
Potri.T007800.1Potri.T009500.1Potri.T009000.1Potri.T009600.1Potri.T032700.6
Potri.T032700.5Potri.T032700.4Potri.T032700.3Potri.T032700.2Potri.T032700.1
Potri.011G072800.1Potri.T009900.1Potri.T072700.1Potri.011G072300.1Potri.004G063200.5
Potri.004G063200.4Potri.004G063200.3Potri.004G063200.2Potri.004G063200.1Potri.T032400.2
Potri.T032400.1Potri.011G072600.1Potri.011G075400.3Potri.011G075400.2Potri.011G075400.1
Potri.004G063500.1Potri.T009100.1Potri.T033000.1Potri.T032200.2Potri.T032200.1
Potri.T008600.2Potri.T008600.1Potri.004G063500.2Potri.016G012100.1Potri.016G011200.5
Potri.016G011200.4Potri.016G011200.1Potri.016G011400.2Potri.016G011400.1Potri.010G155600.1
Potri.006G014300.1Potri.T008900.1Potri.006G014100.2Potri.006G014100.1
Prunus persicappa000854mppa000741mppa000742mppa001005mppa000698m
ppa001122mppa001161mppa026371mppa017351mppa000939m
ppa000808mppa015564mppa001834mppa003884mppa021182m
Ricinus communis27894.m00077429628.m00076427894.m00077527894.m00077830026.m001493
29618.m00010230026.m001490.397.56830026.m001490.397.56830026.m00149230026.m001491
Setaria italicaSi016192mSi016254mSi016251mSi028799mSi028810m
Sorghum bicolorSb04g008350.1
Thellungiella halophilaThhalv10011204mThhalv10006670mThhalv10007070mThhalv10006761mThhalv10012029m
Thhalv10006680mThhalv10019958m
Vitis viniferaGSVIVT01014147001GSVIVT01014138001GSVIVT01014149001GSVIVT01014145001GSVIVT01014150001
GSVIVT01014134001GSVIVT01021289001GSVIVT01021285001GSVIVT01021291001GSVIVT01014128001
GSVIVT01021286001GSVIVT01014120001GSVIVT01014117001GSVIVT01034309001GSVIVT01014113001
GSVIVT01014110001GSVIVT01020786001GSVIVT01021278001GSVIVT01021297001GSVIVT01021293001
GSVIVT01021282001GSVIVT01000677001GSVIVT01021283001GSVIVT01021280001GSVIVT01001886001
GSVIVT01034320001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)