Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.003G032600.1 |
Family | GH17 |
Protein Properties | Length: 390 Molecular Weight: 42532 Isoelectric Point: 8.376 |
Chromosome | Chromosome/Scaffold: 03 Start: 4081151 End: 4083656 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 32 | 350 | 0 |
GVNYGKIADNLPSPSSVVTLLKAAKIKNTRIYDADHEVLKAFKGSGIEIVIGLGNEFLKEMSVGEDRAMDWIKENVQPFLPGTKIVGIAVGNEILGGGDH ELWEVLLPSVKNVYGALGRLGLTKVVEVSSPHSEAVFTNSFPPSACVFKDDVLVYMKPLLQFFSKIGSPFYINAYPFLAYKSDPEHIDINYALFKSNQGI LDSKTNLHYDNMFEAQVDAAYAALEKAGFPKMEVIVSETGWASRGDADEAGASLENARTYNRNLRKRLMKKKGTPYRPKFVARAYIFALFNENLKPGPTS ERNFGLFKPDGSIAYDIGF |
Full Sequence |
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Protein Sequence Length: 390 Download |
MASSSFFLWL LLVFSAISSN VLTVYAFKGT YGVNYGKIAD NLPSPSSVVT LLKAAKIKNT 60 RIYDADHEVL KAFKGSGIEI VIGLGNEFLK EMSVGEDRAM DWIKENVQPF LPGTKIVGIA 120 VGNEILGGGD HELWEVLLPS VKNVYGALGR LGLTKVVEVS SPHSEAVFTN SFPPSACVFK 180 DDVLVYMKPL LQFFSKIGSP FYINAYPFLA YKSDPEHIDI NYALFKSNQG ILDSKTNLHY 240 DNMFEAQVDA AYAALEKAGF PKMEVIVSET GWASRGDADE AGASLENART YNRNLRKRLM 300 KKKGTPYRPK FVARAYIFAL FNENLKPGPT SERNFGLFKP DGSIAYDIGF TGLKDSSASS 360 LIPFKGIGGS SCTLLLTTCI TLLLLISAS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 3.0e-96 | 32 | 350 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN70046.1 | 0 | 22 | 387 | 20 | 381 | hypothetical protein [Vitis vinifera] |
EMBL | CBI36326.1 | 0 | 22 | 385 | 31 | 395 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002265779.1 | 0 | 22 | 353 | 21 | 352 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002299750.1 | 0 | 16 | 365 | 2 | 352 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002327527.1 | 0 | 24 | 365 | 1 | 342 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghs_B | 0 | 32 | 350 | 2 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 32 | 350 | 2 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 2cyg_A | 0 | 32 | 350 | 2 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 32 | 351 | 3 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 32 | 351 | 3 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |