| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.003G040000.1 |
| Family | GH35 |
| Protein Properties | Length: 551 Molecular Weight: 60943.1 Isoelectric Point: 5.5279 |
| Chromosome | Chromosome/Scaffold: 03 Start: 5294825 End: 5308459 |
| Description | beta-galactosidase 17 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH35 | 1 | 246 | 0 |
| MLRPGPYICGEWDLGGFPAWLLAIEPPLKLRSSDPAYLRLVDNWWGILLPKVAPFLYNNGGPIIMVQIENEFGSYGDDKAYLHHLVKLARGHLGDGIILY TTDGGSRENLEKGTIRGDAVFSTVDFTTGDDPWPIFKLQKEFNAPGKSPPLSSEFYTGWLTHWGEKNAKTGADFTASALEKILSQNGSAVLYMVHGGTNF GFYNGANTGVDESDYKPDITSYDYDAPISESGDVENAKFNALRRVI | |||
| Full Sequence |
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| Protein Sequence Length: 551 Download |
| MLRPGPYICG EWDLGGFPAW LLAIEPPLKL RSSDPAYLRL VDNWWGILLP KVAPFLYNNG 60 GPIIMVQIEN EFGSYGDDKA YLHHLVKLAR GHLGDGIILY TTDGGSRENL EKGTIRGDAV 120 FSTVDFTTGD DPWPIFKLQK EFNAPGKSPP LSSEFYTGWL THWGEKNAKT GADFTASALE 180 KILSQNGSAV LYMVHGGTNF GFYNGANTGV DESDYKPDIT SYDYDAPISE SGDVENAKFN 240 ALRRVIELHT AASLPSVPSD NGKMGYGPIQ LQKTAFLFDL LDNINPADVV ESENPLSMES 300 VGQMFGFLLY VSEYTPKDDK SVLLIPEVHD RAQVFTLCHS EDNSRRPTHV GSIDRLSSKK 360 LGLPNAKCAS NISLFVLVEN QGHVNYGPYI FDKKGILSSV FLDGIILHGW KMIPIPFHNL 420 NEVPKINLII EVAHSRFITV STQRELKDKP VPAFFTGHFF IENANQIHDT FISFSGWGKG 480 IAVVNDFNIG RYWPSFGPQC NLYVPAPILR HGENVLVILE LESPNPELVI HSVDHPDFTC 540 GSSKSSVHQL * |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam13364 | BetaGal_dom4_5 | 4.0e-5 | 454 | 519 | 69 | + Beta-galactosidase jelly roll domain. This domain is found in beta galactosidase enzymes. It has a jelly roll fold. | ||
| COG1874 | LacA | 6.0e-15 | 2 | 522 | 568 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| PLN03059 | PLN03059 | 7.0e-22 | 2 | 254 | 264 | + beta-galactosidase; Provisional | ||
| pfam01301 | Glyco_hydro_35 | 3.0e-107 | 1 | 249 | 249 | + Glycosyl hydrolases family 35. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI35958.1 | 0 | 1 | 547 | 160 | 707 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_001031273.1 | 0 | 1 | 550 | 86 | 635 | BGAL17 (beta-galactosidase 17); beta-galactosidase/ catalytic/ cation binding [Arabidopsis thaliana] |
| RefSeq | NP_565051.1 | 0 | 1 | 550 | 148 | 697 | BGAL17 (beta-galactosidase 17); beta-galactosidase/ catalytic/ cation binding [Arabidopsis thaliana] |
| RefSeq | XP_002280228.1 | 0 | 1 | 547 | 136 | 683 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002327549.1 | 0 | 1 | 550 | 94 | 643 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3thd_D | 0 | 1 | 548 | 96 | 629 | A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 |
| PDB | 3thd_C | 0 | 1 | 548 | 96 | 629 | A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 |
| PDB | 3thd_B | 0 | 1 | 548 | 96 | 629 | A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 |
| PDB | 3thd_A | 0 | 1 | 548 | 96 | 629 | A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 |
| PDB | 3thc_D | 0 | 1 | 548 | 96 | 629 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| CO091306 | 282 | 1 | 282 | 0 |
| EY723876 | 269 | 71 | 339 | 0 |
| JG640395 | 261 | 22 | 253 | 0 |
| EH756620 | 254 | 81 | 334 | 0 |
| JG640400 | 247 | 22 | 239 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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