| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.003G053700.1 |
| Family | AA2 |
| Protein Properties | Length: 462 Molecular Weight: 50395.2 Isoelectric Point: 7.1543 |
| Chromosome | Chromosome/Scaffold: 03 Start: 7930802 End: 7934155 |
| Description | Peroxidase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| AA2 | 95 | 179 | 1.1e-24 |
| NKVNTRVAPALLRLMFHDCFIEGCDASVLLDAAIGIDSEKDSPPNQNLKGFDIIDRIKSEIEKVCPGVVSCADIVALAAREGVVL | |||
| Full Sequence |
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| Protein Sequence Length: 462 Download |
| MLTSIFGIGN MRKLSFLVFI ICILISVKNQ NAEIKKNSWP YSSWDSFPSI FLSPLSFMEE 60 EEEVGHSNRS LEYDFYRDSC PQAERIILRV VQELNKVNTR VAPALLRLMF HDCFIEGCDA 120 SVLLDAAIGI DSEKDSPPNQ NLKGFDIIDR IKSEIEKVCP GVVSCADIVA LAAREGVVLI 180 LQHIKLPSPN ADLSETLASF ASRGFDERET VSLLGGHSIG VIHCKFFQNR LYNFSWTNKP 240 DPSLDTGFLS LLRSRCNNNN SSKEASPSPS PSFKAPPPSS APSTSFDGTK SPSTAPSLSC 300 SGSPSSSSST SEMRVSPSSS TAPSPSLKGS ISSPHSSSAP SSASFEDSLL STLEEPGMNM 360 AYEGPGVDFG TLYYHGLLQG KGILYADQQL MAGVETRIWV RAYASDISLF RRDYALAMMK 420 LSNLRVLTGS TGQVRLHCSK NRQSSILFGF FSSLKVSYKY R* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03030 | PLN03030 | 5.0e-6 | 369 | 441 | 77 | + cationic peroxidase; Provisional | ||
| cd00693 | secretory_peroxidase | 3.0e-22 | 369 | 440 | 72 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. | ||
| pfam00141 | peroxidase | 4.0e-44 | 87 | 219 | 153 | + Peroxidase. | ||
| PLN03030 | PLN03030 | 2.0e-51 | 75 | 248 | 194 | + cationic peroxidase; Provisional | ||
| cd00693 | secretory_peroxidase | 2.0e-93 | 71 | 248 | 197 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004601 | peroxidase activity |
| GO:0006979 | response to oxidative stress |
| GO:0020037 | heme binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI36139.1 | 0 | 1 | 440 | 1 | 402 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002279534.1 | 0 | 1 | 271 | 1 | 288 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002298218.1 | 0 | 58 | 267 | 1 | 232 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002298218.1 | 5.99994e-41 | 358 | 440 | 225 | 307 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002516056.1 | 0 | 1 | 440 | 1 | 435 | Peroxidase 57 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1fhf_C | 0 | 75 | 259 | 6 | 211 | A Chain A, The Structure Of Soybean Peroxidase |
| PDB | 1fhf_C | 0.0002 | 318 | 439 | 187 | 300 | A Chain A, The Structure Of Soybean Peroxidase |
| PDB | 1fhf_B | 0 | 75 | 259 | 6 | 211 | A Chain A, The Structure Of Soybean Peroxidase |
| PDB | 1fhf_B | 0.0002 | 318 | 439 | 187 | 300 | A Chain A, The Structure Of Soybean Peroxidase |
| PDB | 1fhf_A | 0 | 75 | 259 | 6 | 211 | A Chain A, The Structure Of Soybean Peroxidase |
| Metabolic Pathways | |||
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| Pathway Name | Reaction | EC | Protein Name |
| betanidin degradation | RXN-8635 | EC-1.11.1.7 | peroxidase |
| Signal Peptide | ||||
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| Cleavage Site | ||||
| 29 | ||||
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DR936526 | 204 | 64 | 247 | 0 |
| EX092668 | 211 | 58 | 248 | 0 |
| DY283168 | 284 | 1 | 248 | 0 |
| DR930941 | 202 | 68 | 248 | 0 |
| DT762021 | 202 | 68 | 248 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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