Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.003G072800.1 |
Family | CE8 |
Protein Properties | Length: 585 Molecular Weight: 63945.9 Isoelectric Point: 9.4759 |
Chromosome | Chromosome/Scaffold: 03 Start: 10170070 End: 10174363 |
Description | pectin methylesterase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 273 | 568 | 0 |
DVVVAADGSGNYKTVSAAVAAAPKKSSKRYIIRIKAGVYRENVDVPKDKTNIMFMGDGRKTTIITASRNVVDGSTTFNSATVAAVGQGFLARGITFQNTA GPSKHQAVALRVGSDLSAFYDCDMLAYQDTLYVHSNRQFFINCLVAGTVDFIFGNAAVVLQDCDIHARRPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIG ATSDLQPVKSSFPTYLGRPWKEYSRTVIMQSSITDVIQPAGWFEWSGSFALNTLYYAEYQNSGAGAGTSRRVTWKGYRVITSATEAQRFTPGNFIA |
Full Sequence |
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Protein Sequence Length: 585 Download |
MLVAKMTQDK QSLTGISDSG KHISIFKKNK KLFLVILASL LLVTAIIAIV AGVNSHKSSK 60 NEGTHAILKS SCSSTLYPEL CYSAVATVPG ATSNLASQKD VIELSINLTT KAVQHNFFTV 120 EKLIATKKLT KREKTALHDC LEIIDETLDE LHEALVDLND YPNNKSLKKH ADDLKTLLSS 180 AITNQETCLD GFSHDEADKK VRKALLKGQI HVEKMCSNVL AMIKNMTDTD VANELKTTNR 240 KLMQEKEGNE SEWPEWMSVA DRRLLQSSSV TPDVVVAADG SGNYKTVSAA VAAAPKKSSK 300 RYIIRIKAGV YRENVDVPKD KTNIMFMGDG RKTTIITASR NVVDGSTTFN SATVAAVGQG 360 FLARGITFQN TAGPSKHQAV ALRVGSDLSA FYDCDMLAYQ DTLYVHSNRQ FFINCLVAGT 420 VDFIFGNAAV VLQDCDIHAR RPNSGQKNMV TAQGRTDPNQ NTGIVIQKSR IGATSDLQPV 480 KSSFPTYLGR PWKEYSRTVI MQSSITDVIQ PAGWFEWSGS FALNTLYYAE YQNSGAGAGT 540 SRRVTWKGYR VITSATEAQR FTPGNFIAGS SWLRSTTFPF SLGL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02201 | PLN02201 | 3.0e-158 | 132 | 584 | 455 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02484 | PLN02484 | 2.0e-172 | 55 | 584 | 534 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 2.0e-176 | 67 | 584 | 522 | + pectinesterase/pectinesterase inhibitor | ||
PLN02313 | PLN02313 | 0 | 54 | 584 | 542 | + Pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 273 | 570 | 298 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAC01624.1 | 0 | 6 | 584 | 1 | 579 | putative pectin methylesterase [Populus tremula x Populus tremuloides] |
RefSeq | XP_002265171.1 | 0 | 3 | 584 | 28 | 611 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002304257.1 | 0 | 6 | 584 | 1 | 579 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002326621.1 | 0 | 6 | 584 | 1 | 579 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002532944.1 | 0 | 6 | 559 | 1 | 557 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 266 | 584 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 270 | 584 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 3e-26 | 284 | 559 | 18 | 327 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 3e-26 | 284 | 559 | 18 | 327 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 5e-26 | 284 | 559 | 18 | 327 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |