CAZyme Information

Basic Information
SpeciesPopulus trichocarpa
Cazyme IDPotri.003G105500.1
FamilyGT4
Protein PropertiesLength: 479 Molecular Weight: 53591.5 Isoelectric Point: 9.5748
ChromosomeChromosome/Scaffold: 03 Start: 12985191 End: 12987581
DescriptionUDP-Glycosyltransferase superfamily protein
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT43094472.1e-24
  VLGVAGRLVKDKGHPLLYEAFSEFMTKHPDVYLIVAGSGPWQQRYKELGTRVLVLGSMSPSALRAFYNSIDIFVNPTLRPQGLDLTLMEAMMSGKPVMAS
  RFPSIKGTIVVDDEFGFMFSPNVASLLEALEAAVMEGSR
Full Sequence
Protein Sequence     Length: 479     Download
MAFNSKPKKP HAIPSQSKSS LCTTLFFIVL FTIPALFLLH APTTSICTTL IANHANKPWS    60
GDLRNADFAW NRLAFIENKP PPVKLKIAVF SRKWPVGTTP GGMERHAYTL HTALAHRGHQ    120
VHIFTSPVDE NNPSVSHGSA VSYPQIHFHE GEPGKWRYNK AWEQFDEENQ RERPFDVVHS    180
ESVALPHWLA RNVQNLAVSW HGIALESLQS SIYQDLTRKP KEPISPDFNR SLHGVVPKVL    240
NEIRFFKNYE HHVAISDSCG EMLRDVYQIP SRRVHVIVNG VDEHGFGVDV RLGHEFRSKI    300
GVPINASLVL GVAGRLVKDK GHPLLYEAFS EFMTKHPDVY LIVAGSGPWQ QRYKELGTRV    360
LVLGSMSPSA LRAFYNSIDI FVNPTLRPQG LDLTLMEAMM SGKPVMASRF PSIKGTIVVD    420
DEFGFMFSPN VASLLEALEA AVMEGSRRLA QRGKACQQYA ASMFTASKMA LAYERKNY*     480
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
COG0438RfaG3.0e-3086475399+
TIGR00032argG2.0e-32101475382+
cd03811GT1_WabH_like9.0e-33101466377+
cd03798GT1_wlbH_like2.0e-35101475395+
cd03801GT1_YqgM_like2.0e-5986475402+
Gene Ontology
GO TermDescription
GO:0009058biosynthetic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
RefSeqXP_002271072.1014751479PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002271108.1014751478PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002303479.1014751475predicted protein [Populus trichocarpa]
RefSeqXP_002326600.1014751474predicted protein [Populus trichocarpa]
RefSeqXP_002519899.1014752472glycosyltransferase, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB2gek_A0.000000019944433348A Chain A, Pectin Methylesterase From Yersinia Enterocolitica
PDB2gej_A0.000000019944433348A Chain A, Crystal Structure Of Phosphatidylinositol Mannosyltransferase (Pima) From Mycobacterium Smegmatis In Complex With Gdp-Man
PDB3c4v_B0.0000001267445183379A Chain A, Crystal Structure Of Phosphatidylinositol Mannosyltransferase (Pima) From Mycobacterium Smegmatis In Complex With Gdp-Man
PDB3c4v_A0.0000001267445183379A Chain A, Crystal Structure Of Phosphatidylinositol Mannosyltransferase (Pima) From Mycobacterium Smegmatis In Complex With Gdp-Man
PDB3c4q_B0.0000001267445183379A Chain A, Structure Of The Retaining Glycosyltransferase Msha : The First Step In Mycothiol Biosynthesis. Organism : Corynebacterium Glutamicum- Complex With Udp
Transmembrane Domains
StartEnd
2143
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
AM7324152871694550
EX26844734813470
GR1862222521824330
EX263793272323020
EX263793293053330.00004
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_055_00071.1Aquca_004_00554.1
Arabidopsis lyrata316266919149492915
Arabidopsis thalianaAT1G73160.1AT5G59070.1AT4G19460.1
Brachypodium distachyonBradi2g45370.1
Brassica rapaBra012542Bra003857Bra013399Bra020331
Carica papayaevm.model.supercontig_305.3
Capsella rubellaCarubv10004612mCarubv10021524m
Citrus clementinaCiclev10008126mCiclev10003490m
Citrus sinensisorange1.1g039338morange1.1g044542m
Cucumis sativusCucsa.268510.1
Eucalyptus grandisEucgr.E01172.1Eucgr.F03250.1
Fragaria vescamrna27708.1-v1.0-hybridmrna27178.1-v1.0-hybrid
Glycine maxGlyma09g34990.1Glyma01g35440.1Glyma16g17250.1Glyma16g08210.1
Gossypium raimondiiGorai.009G372800.1Gorai.008G217900.1
Linum usitatissimumLus10032187Lus10014499Lus10033297Lus10034760
Malus domesticaMDP0000252217MDP0000510770MDP0000280727MDP0000690085
Manihot esculentacassava4.1_023608mcassava4.1_022788m
Medicago truncatulaMedtr5g026360.1Medtr8g071900.1
Mimulus guttatusmgv1a005617mmgv1a027119m
Oryza sativaLOC_Os01g46430.1
Panicum virgatumPavirv00039421mPavirv00050283m
Physcomitrella patensPp1s115_97V6.1Pp1s115_97V6.2Pp1s231_59V6.1
Phaseolus vulgarisPhvul.002G124600.1Phvul.003G277200.1
Picea abiesMA_159118g0690MA_58772g0010
Populus trichocarpaPotri.011G097000.1Potri.001G128300.1
Prunus persicappa004871mppa024212m
Ricinus communis30150.m00047029827.m002616
Setaria italicaSi001150m
Selaginella moellendorffii79637
Sorghum bicolorSb03g029770.1
Thellungiella halophilaThhalv10013459mThhalv10027268mThhalv10019571m
Vitis viniferaGSVIVT01036920001GSVIVT01036921001GSVIVT01036924001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny