Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.003G139600.2 |
Family | GH9 |
Protein Properties | Length: 531 Molecular Weight: 58144.5 Isoelectric Point: 7.7797 |
Chromosome | Chromosome/Scaffold: 03 Start: 15733328 End: 15738267 |
Description | glycosyl hydrolase 9C2 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 27 | 488 | 0 |
DYGQALSKSLLFFEAQRSGYLPHNQRVTWRANSGLNDGKASGVDLVGGYYDAGDNVKFGLPMAFTITMMSWSIIEYGKQLGSSGELGNTMDAVKWGTDYL IKAHPQPYVLYGEVGDGNTDHYCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMAAASIVFRHSNPTYANELLTHAHQLFDFADKYRGKYDSSISVAQ KYYRSVSGYNDELLWAAAWLYQATNNQYYLDYLGNNGDSMGGTGWGMTEFGWDVKYAGVQTLVAKFLMQGKAGHHAPVFEKYQQKAEYFMCSCLGKGTRN VQKTPGGLIYRQRWNNMQFVTGASFLGAVYSDYLASAGRNLNCAAGNVAPSQLLTFAKSQVDYILGDNPRATSYMVGYGNNYPRQVHHRGSSIVSYKVDP TFVSCRGGYATWFSRKGSDPNLLTGAIVGGPDAYDNFADERDNYEQTEPATYNNAPLLGLLA |
Full Sequence |
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Protein Sequence Length: 531 Download |
MVKFARLISM APLLLLLCFP LAFAGHDYGQ ALSKSLLFFE AQRSGYLPHN QRVTWRANSG 60 LNDGKASGVD LVGGYYDAGD NVKFGLPMAF TITMMSWSII EYGKQLGSSG ELGNTMDAVK 120 WGTDYLIKAH PQPYVLYGEV GDGNTDHYCW QRPEDMTTDR RAYKIDPSNP GSDLAGETAA 180 AMAAASIVFR HSNPTYANEL LTHAHQLFDF ADKYRGKYDS SISVAQKYYR SVSGYNDELL 240 WAAAWLYQAT NNQYYLDYLG NNGDSMGGTG WGMTEFGWDV KYAGVQTLVA KFLMQGKAGH 300 HAPVFEKYQQ KAEYFMCSCL GKGTRNVQKT PGGLIYRQRW NNMQFVTGAS FLGAVYSDYL 360 ASAGRNLNCA AGNVAPSQLL TFAKSQVDYI LGDNPRATSY MVGYGNNYPR QVHHRGSSIV 420 SYKVDPTFVS CRGGYATWFS RKGSDPNLLT GAIVGGPDAY DNFADERDNY EQTEPATYNN 480 APLLGLLARL SGGHGGYNQL LPVVVPGPIE KKPAPQSKVT PAPGIILCSC * 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02171 | PLN02171 | 0 | 1 | 523 | 530 | + endoglucanase | ||
PLN02420 | PLN02420 | 0 | 25 | 490 | 468 | + endoglucanase | ||
PLN02340 | PLN02340 | 0 | 25 | 524 | 501 | + endoglucanase | ||
PLN00119 | PLN00119 | 0 | 27 | 491 | 465 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 0 | 27 | 488 | 464 | + Glycosyl hydrolase family 9. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAI68019.1 | 0 | 1 | 521 | 1 | 518 | endo-beta-1,4-glucanase [Prunus persica] |
EMBL | CAI68020.1 | 0 | 1 | 521 | 1 | 518 | endo-beta-1,4-glucanase [Prunus persica] |
RefSeq | XP_002270880.1 | 0 | 1 | 523 | 1 | 530 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002299478.1 | 0 | 1 | 523 | 1 | 523 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002303645.1 | 0 | 1 | 523 | 1 | 523 | glycosyl hydrolase family 9 [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 26 | 490 | 3 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 1ksc_A | 0 | 26 | 490 | 3 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 1ks8_A | 0 | 26 | 490 | 3 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 27 | 516 | 5 | 462 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 27 | 516 | 5 | 462 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |