Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.003G147600.1 |
Family | GH9 |
Protein Properties | Length: 370 Molecular Weight: 40688.4 Isoelectric Point: 6.5791 |
Chromosome | Chromosome/Scaffold: 03 Start: 16294404 End: 16297074 |
Description | cellulase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 2 | 363 | 0 |
DHRCWERPEDMDTPRNVYKVTTQNPGSDVAAETAAALAAASIVFKKSDPSYSTELLHAAMKVFNFADRYRGSYSDSLNSAVCPFYCSYSGYQVRLSSVLG FLKSIIDLNLSLSIQDELLWGASWLHKASLNGTYLAYIQSNGHTMGSDDDDYSFSWDDKRPGTKILLSKEFLEKTTEEFQLYKSHSDNYICSLIPGTSSF QAQYTPGGLFYKATESNLQYVTSTTFLLLTYAKYLGSNGGVAKCGGSTVTAESLIAQAKKQVDYILGDNPAKMSYMVGFGNKYPQHVHHRGSSVPSIHAH PNRISCNDGFQYLYSSSPNPNVLVGAIVGGPDNRDHFADDRNSYQQSEPATYINAPFVGALA |
Full Sequence |
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Protein Sequence Length: 370 Download |
MDHRCWERPE DMDTPRNVYK VTTQNPGSDV AAETAAALAA ASIVFKKSDP SYSTELLHAA 60 MKVFNFADRY RGSYSDSLNS AVCPFYCSYS GYQVRLSSVL GFLKSIIDLN LSLSIQDELL 120 WGASWLHKAS LNGTYLAYIQ SNGHTMGSDD DDYSFSWDDK RPGTKILLSK EFLEKTTEEF 180 QLYKSHSDNY ICSLIPGTSS FQAQYTPGGL FYKATESNLQ YVTSTTFLLL TYAKYLGSNG 240 GVAKCGGSTV TAESLIAQAK KQVDYILGDN PAKMSYMVGF GNKYPQHVHH RGSSVPSIHA 300 HPNRISCNDG FQYLYSSSPN PNVLVGAIVG GPDNRDHFAD DRNSYQQSEP ATYINAPFVG 360 ALAFFSAKN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02613 | PLN02613 | 1.0e-126 | 2 | 363 | 364 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 5.0e-132 | 2 | 363 | 367 | + Glycosyl hydrolase family 9. | ||
PLN03009 | PLN03009 | 1.0e-134 | 2 | 367 | 368 | + cellulase | ||
PLN02308 | PLN02308 | 3.0e-147 | 2 | 367 | 366 | + endoglucanase | ||
PLN02266 | PLN02266 | 5.0e-169 | 1 | 366 | 366 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAA06877.1 | 0 | 1 | 369 | 149 | 494 | cellulase precursor [Populus alba] |
DDBJ | BAA77239.1 | 0 | 1 | 369 | 149 | 494 | endo-1,4-beta glucanase [Populus alba] |
DDBJ | BAB39482.1 | 0 | 1 | 369 | 149 | 494 | endo-1,4-beta glucanase [Populus alba] |
RefSeq | XP_002299423.1 | 0 | 1 | 369 | 149 | 494 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518918.1 | 0 | 2 | 369 | 150 | 494 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 2 | 367 | 123 | 430 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 1ksc_A | 0 | 2 | 367 | 123 | 430 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 1ks8_A | 0 | 2 | 367 | 123 | 430 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 2 | 365 | 124 | 440 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 2 | 365 | 124 | 440 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DT515727 | 296 | 75 | 370 | 0 |
CV267046 | 247 | 124 | 370 | 0 |
CX658587 | 232 | 139 | 370 | 0 |
EE108808 | 244 | 116 | 359 | 0 |
DT742837 | 304 | 18 | 321 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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