Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.003G147600.2 |
Family | GH9 |
Protein Properties | Length: 347 Molecular Weight: 38190.3 Isoelectric Point: 6.4301 |
Chromosome | Chromosome/Scaffold: 03 Start: 16294404 End: 16297074 |
Description | cellulase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 2 | 340 | 0 |
DHRCWERPEDMDTPRNVYKVTTQNPGSDVAAETAAALAAASIVFKKSDPSYSTELLHAAMKVFNFADRYRGSYSDSLNSAVCPFYCSYSGYQDELLWGAS WLHKASLNGTYLAYIQSNGHTMGSDDDDYSFSWDDKRPGTKILLSKEFLEKTTEEFQLYKSHSDNYICSLIPGTSSFQAQYTPGGLFYKATESNLQYVTS TTFLLLTYAKYLGSNGGVAKCGGSTVTAESLIAQAKKQVDYILGDNPAKMSYMVGFGNKYPQHVHHRGSSVPSIHAHPNRISCNDGFQYLYSSSPNPNVL VGAIVGGPDNRDHFADDRNSYQQSEPATYINAPFVGALA |
Full Sequence |
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Protein Sequence Length: 347 Download |
MDHRCWERPE DMDTPRNVYK VTTQNPGSDV AAETAAALAA ASIVFKKSDP SYSTELLHAA 60 MKVFNFADRY RGSYSDSLNS AVCPFYCSYS GYQDELLWGA SWLHKASLNG TYLAYIQSNG 120 HTMGSDDDDY SFSWDDKRPG TKILLSKEFL EKTTEEFQLY KSHSDNYICS LIPGTSSFQA 180 QYTPGGLFYK ATESNLQYVT STTFLLLTYA KYLGSNGGVA KCGGSTVTAE SLIAQAKKQV 240 DYILGDNPAK MSYMVGFGNK YPQHVHHRGS SVPSIHAHPN RISCNDGFQY LYSSSPNPNV 300 LVGAIVGGPD NRDHFADDRN SYQQSEPATY INAPFVGALA FFSAKN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02613 | PLN02613 | 2.0e-131 | 2 | 340 | 341 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 9.0e-136 | 2 | 340 | 344 | + Glycosyl hydrolase family 9. | ||
PLN03009 | PLN03009 | 3.0e-139 | 2 | 344 | 345 | + cellulase | ||
PLN02308 | PLN02308 | 6.0e-152 | 2 | 344 | 343 | + endoglucanase | ||
PLN02266 | PLN02266 | 1.0e-173 | 1 | 343 | 343 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAA06877.1 | 0 | 1 | 346 | 149 | 494 | cellulase precursor [Populus alba] |
DDBJ | BAA77239.1 | 0 | 1 | 346 | 149 | 494 | endo-1,4-beta glucanase [Populus alba] |
DDBJ | BAB39482.1 | 0 | 1 | 346 | 149 | 494 | endo-1,4-beta glucanase [Populus alba] |
RefSeq | XP_002299423.1 | 0 | 1 | 346 | 149 | 494 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518918.1 | 0 | 2 | 346 | 150 | 494 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 2 | 344 | 123 | 430 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 1ksc_A | 0 | 2 | 344 | 123 | 430 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 1ks8_A | 0 | 2 | 344 | 123 | 430 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 2 | 342 | 124 | 440 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 2 | 342 | 124 | 440 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DT515727 | 273 | 75 | 347 | 0 |
CV267046 | 247 | 101 | 347 | 0 |
CX658587 | 232 | 116 | 347 | 0 |
EE108808 | 244 | 93 | 336 | 0 |
DT742837 | 281 | 18 | 298 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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