Basic Information | |
---|---|
Species | Populus trichocarpa |
Cazyme ID | Potri.003G151700.1 |
Family | GH9 |
Protein Properties | Length: 620 Molecular Weight: 68494.6 Isoelectric Point: 9.0281 |
Chromosome | Chromosome/Scaffold: 03 Start: 16555309 End: 16560075 |
Description | glycosyl hydrolase 9A1 |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH9 | 109 | 583 | 0 |
NYTLALHKALMFFNAQRSGKLPKHNNVSWRGSSCLGDGKGKQGSFYKDLVGGYYDAGDAIKFHFPASFSMTMLSWSVIEYSAKYEAAGELNHVKEIIKWG ADYFLKTFNSSADTIDRIVAQVGSGDTSGGSTTQNDHYCWMRPEDIDYVRPVTECSSCSDLAAEMAAALASASIVFKDNKAYSQKLVHGAKTLFKFARDQ RGRYSASGSEAAIFYNSTSYWDEFIWGGAWLYYATGNNSYLQLATMPGLAKHAGAFWGGPDYGVLSWDNKLAGAQLLLSRLRLFLSPGYPYEEILSTFHN QTSIIMCSYLPIFTKFNRTKGGLIELNHGRPQPLQYVVNAAFLATLFSDYLEAADTPGWYCGPNFYSTDVLRDFAKTQIDYILGKNPRKMSYIVGFGNHY PKHLHHRGASIPKNKIRYNCKGGWKWRDTSKPNPNTLVGAMVAGPDRHDGFHDVRTNYNYTEPTIAGNAGLVAAL |
Full Sequence |
---|
Protein Sequence Length: 620 Download |
MYGRDPWGGP LEINAADSAT DDDRSRNLND LDRAALSRPL DETQQSWLLG PAEQKKKKKY 60 VDLGCIIVSR KIFVWTVGSI VAAGLLVGLI TLIVKTVPRH HHSHAPADNY TLALHKALMF 120 FNAQRSGKLP KHNNVSWRGS SCLGDGKGKQ GSFYKDLVGG YYDAGDAIKF HFPASFSMTM 180 LSWSVIEYSA KYEAAGELNH VKEIIKWGAD YFLKTFNSSA DTIDRIVAQV GSGDTSGGST 240 TQNDHYCWMR PEDIDYVRPV TECSSCSDLA AEMAAALASA SIVFKDNKAY SQKLVHGAKT 300 LFKFARDQRG RYSASGSEAA IFYNSTSYWD EFIWGGAWLY YATGNNSYLQ LATMPGLAKH 360 AGAFWGGPDY GVLSWDNKLA GAQLLLSRLR LFLSPGYPYE EILSTFHNQT SIIMCSYLPI 420 FTKFNRTKGG LIELNHGRPQ PLQYVVNAAF LATLFSDYLE AADTPGWYCG PNFYSTDVLR 480 DFAKTQIDYI LGKNPRKMSY IVGFGNHYPK HLHHRGASIP KNKIRYNCKG GWKWRDTSKP 540 NPNTLVGAMV AGPDRHDGFH DVRTNYNYTE PTIAGNAGLV AALVALSGDK TTGIDKNTIF 600 SAVPPMFPTP PPPPAPWKP* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02266 | PLN02266 | 7.0e-103 | 100 | 571 | 486 | + endoglucanase | ||
PLN02171 | PLN02171 | 7.0e-105 | 109 | 572 | 474 | + endoglucanase | ||
PLN02613 | PLN02613 | 6.0e-106 | 107 | 572 | 478 | + endoglucanase | ||
PLN02345 | PLN02345 | 1.0e-130 | 113 | 572 | 470 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 3.0e-155 | 109 | 573 | 471 | + Glycosyl hydrolase family 9. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAS45400.1 | 0 | 1 | 603 | 1 | 603 | endo-1,4-beta-glucanase [Populus tremuloides] |
GenBank | AAT75041.1 | 0 | 1 | 603 | 1 | 603 | Cel9A [Populus tremula x Populus tremuloides] |
GenBank | ADB82903.1 | 0 | 1 | 603 | 1 | 603 | membrane-bound endo-beta-1,4-glucanase [Populus alba x Populus grandidentata] |
RefSeq | XP_002299405.1 | 0 | 1 | 603 | 1 | 603 | endo-1,4-beta-glucanase [Populus trichocarpa] |
RefSeq | XP_002332697.1 | 0 | 1 | 603 | 1 | 603 | hypothetical protein POPTRDRAFT_675657 [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 109 | 586 | 4 | 428 | A Chain A, Bacillus Subtilis Pectate Lyase |
PDB | 1ksc_A | 0 | 109 | 586 | 4 | 428 | A Chain A, Bacillus Subtilis Pectate Lyase |
PDB | 1ks8_A | 0 | 109 | 586 | 4 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 106 | 586 | 2 | 440 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 106 | 586 | 2 | 440 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |