| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.003G178000.3 |
| Family | GH116 |
| Protein Properties | Length: 967 Molecular Weight: 107708 Isoelectric Point: 6.6938 |
| Chromosome | Chromosome/Scaffold: 03 Start: 18588350 End: 18598332 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH116 | 548 | 910 | 0 |
| GRFLYLEGVEYIMWCTYDVHFYASFALLALFPKIELNIQRDFAKAVLSEDGRKVRFLADGSVGIRKARGAVPHDLGTHDPWNEMNAYNIHDTSKWKDLNP KFVLQVYRDFAATGDMSFGVDVWPAVRTAMEYMEQFDRDDDGLVENDGFPDQTYDAWTVHGVSAYCGCLWLASLQAAAAMAMQLGDKYFAELCKSKFAKA KSAFESKLWNGSYFNYDSGSSNNSKSIQADQLAGEWYMASSGLPSLFDDVKIRSALNKIYDFNVMKVRGGKMGAVNGMHPNGKVDETCMQSREIWSGVTY AVAATMILSGMEDKAFTTAEGIFTAGWSEEGYGYWFQTPEAWTIDGHFRSLIYMRPLAIWGMQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 967 Download |
| MVSSNLFHCR KHSWPPEEYI SRNTLQLFDF DSAAPPEQAW RRRLNSHANI LKEFSVTFKE 60 AIQMVRLGIR LWSYVREEAS HGRKAPIDPF TRESCKPSAS QGVPLGGMGS GSISRGFRGE 120 FRQWQIVPGI CESSPIFISR DGGNKNYASV LAPGQHEGIG KAGDQGISSW GWNLSGQHST 180 YHALFPRAWT VYDGEPDPEL KISCRQISPF IPHNYRDSSL PTAVFVYTLV NTGKERAKVS 240 LLFTWANSIG GISHLSGDHV NEPFIGEDGV SGVLLHHKQG NPPVTFAIAA CETQNVSVTV 300 LPSFGLSEGS CTTAKAMWGT MVQDGHFDRG NFNWGPSMPS SPGETLCAAV SASAWVEPHG 360 KCTVAFALAW SSPKIKFLKG SSYHRRYTKF YGTSERAAQN LVHDALTNYK QWEEEIEKWQ 420 DPILKDEKLP EWYKFTLFNE LYFLVAGGTV WIDSSLSSAD TRNGHHRSRE VETTGIKVTE 480 PQVNCNGGPD HTTTNHHNTT SSEQKENNKA FHTKCICKDE SAVSRERGNL DHTLDPFTFL 540 DPLSDDVGRF LYLEGVEYIM WCTYDVHFYA SFALLALFPK IELNIQRDFA KAVLSEDGRK 600 VRFLADGSVG IRKARGAVPH DLGTHDPWNE MNAYNIHDTS KWKDLNPKFV LQVYRDFAAT 660 GDMSFGVDVW PAVRTAMEYM EQFDRDDDGL VENDGFPDQT YDAWTVHGVS AYCGCLWLAS 720 LQAAAAMAMQ LGDKYFAELC KSKFAKAKSA FESKLWNGSY FNYDSGSSNN SKSIQADQLA 780 GEWYMASSGL PSLFDDVKIR SALNKIYDFN VMKVRGGKMG AVNGMHPNGK VDETCMQSRE 840 IWSGVTYAVA ATMILSGMED KAFTTAEGIF TAGWSEEGYG YWFQTPEAWT IDGHFRSLIY 900 MRPLAIWGMQ WALSLPKAIL DAPKINIMER SLLSPSTRFS LIGETGVKKI ATKANCLGNS 960 VFHCSC* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3408 | GDB1 | 0.007 | 565 | 705 | 150 | + Glycogen debranching enzyme [Carbohydrate transport and metabolism] | ||
| COG4354 | COG4354 | 2.0e-26 | 102 | 453 | 363 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam12215 | GBA2_N | 3.0e-59 | 102 | 412 | 329 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
| COG4354 | COG4354 | 6.0e-68 | 528 | 913 | 407 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam04685 | DUF608 | 2.0e-151 | 548 | 911 | 368 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB01359.1 | 0 | 1 | 966 | 1 | 937 | unnamed protein product [Arabidopsis thaliana] |
| RefSeq | NP_189060.2 | 0 | 1 | 966 | 1 | 950 | catalytic/ glucosylceramidase [Arabidopsis thaliana] |
| RefSeq | XP_002285674.1 | 0 | 1 | 966 | 1 | 978 | PREDICTED: similar to catalytic [Vitis vinifera] |
| RefSeq | XP_002303825.1 | 0 | 1 | 966 | 1 | 966 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518119.1 | 0 | 1 | 966 | 1 | 968 | conserved hypothetical protein [Ricinus communis] |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| HO779860 | 279 | 690 | 967 | 0 |
| HO779860 | 148 | 544 | 691 | 0 |
| GT051521 | 333 | 600 | 932 | 0 |
| GT045437 | 318 | 117 | 425 | 0 |
| HO779860 | 78 | 407 | 484 | 1e-24 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
