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Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.003G178000.4 |
Family | GH116 |
Protein Properties | Length: 651 Molecular Weight: 73014.3 Isoelectric Point: 6.1156 |
Chromosome | Chromosome/Scaffold: 03 Start: 18593293 End: 18598388 |
Description | Beta-glucosidase, GBA2 type family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH116 | 232 | 594 | 0 |
GRFLYLEGVEYIMWCTYDVHFYASFALLALFPKIELNIQRDFAKAVLSEDGRKVRFLADGSVGIRKARGAVPHDLGTHDPWNEMNAYNIHDTSKWKDLNP KFVLQVYRDFAATGDMSFGVDVWPAVRTAMEYMEQFDRDDDGLVENDGFPDQTYDAWTVHGVSAYCGCLWLASLQAAAAMAMQLGDKYFAELCKSKFAKA KSAFESKLWNGSYFNYDSGSSNNSKSIQADQLAGEWYMASSGLPSLFDDVKIRSALNKIYDFNVMKVRGGKMGAVNGMHPNGKVDETCMQSREIWSGVTY AVAATMILSGMEDKAFTTAEGIFTAGWSEEGYGYWFQTPEAWTIDGHFRSLIYMRPLAIWGMQ |
Full Sequence |
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Protein Sequence Length: 651 Download |
MWGTMVQDGH FDRGNFNWGP SMPSSPGETL CAAVSASAWV EPHGKCTVAF ALAWSSPKIK 60 FLKGSSYHRR YTKFYGTSER AAQNLVHDAL TNYKQWEEEI EKWQDPILKD EKLPEWYKFT 120 LFNELYFLVA GGTVWIDSSL SSADTRNGHH RSREVETTGI KVTEPQVNCN GGPDHTTTNH 180 HNTTSSEQKE NNKAFHTKCI CKDESAVSRE RGNLDHTLDP FTFLDPLSDD VGRFLYLEGV 240 EYIMWCTYDV HFYASFALLA LFPKIELNIQ RDFAKAVLSE DGRKVRFLAD GSVGIRKARG 300 AVPHDLGTHD PWNEMNAYNI HDTSKWKDLN PKFVLQVYRD FAATGDMSFG VDVWPAVRTA 360 MEYMEQFDRD DDGLVENDGF PDQTYDAWTV HGVSAYCGCL WLASLQAAAA MAMQLGDKYF 420 AELCKSKFAK AKSAFESKLW NGSYFNYDSG SSNNSKSIQA DQLAGEWYMA SSGLPSLFDD 480 VKIRSALNKI YDFNVMKVRG GKMGAVNGMH PNGKVDETCM QSREIWSGVT YAVAATMILS 540 GMEDKAFTTA EGIFTAGWSE EGYGYWFQTP EAWTIDGHFR SLIYMRPLAI WGMQWALSLP 600 KAILDAPKIN IMERSLLSPS TRFSLIGETG VKKIATKANC LGNSVFHCSC * 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3408 | GDB1 | 0.005 | 249 | 389 | 150 | + Glycogen debranching enzyme [Carbohydrate transport and metabolism] | ||
pfam12215 | GBA2_N | 1.0e-10 | 14 | 96 | 84 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
COG4354 | COG4354 | 2.0e-11 | 50 | 137 | 88 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
COG4354 | COG4354 | 2.0e-68 | 212 | 597 | 407 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
pfam04685 | DUF608 | 4.0e-152 | 232 | 595 | 367 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. |
Gene Ontology | |
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GO Term | Description |
GO:0004348 | glucosylceramidase activity |
GO:0006665 | sphingolipid metabolic process |
GO:0016021 | integral to membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN61187.1 | 0 | 1 | 650 | 212 | 900 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_189060.2 | 0 | 1 | 650 | 326 | 950 | catalytic/ glucosylceramidase [Arabidopsis thaliana] |
RefSeq | XP_002285674.1 | 0 | 1 | 650 | 326 | 978 | PREDICTED: similar to catalytic [Vitis vinifera] |
RefSeq | XP_002303825.1 | 0 | 1 | 650 | 317 | 966 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518119.1 | 0 | 1 | 650 | 326 | 968 | conserved hypothetical protein [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO779860 | 279 | 374 | 651 | 0 |
HO779860 | 148 | 228 | 375 | 0 |
GT051521 | 333 | 284 | 616 | 0 |
GT032792 | 325 | 284 | 608 | 0 |
HO779860 | 78 | 91 | 168 | 3e-24 |
Sequence Alignments (This image is cropped. Click for full image.) |
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