| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.003G206000.3 |
| Family | GH127 |
| Protein Properties | Length: 684 Molecular Weight: 75493.3 Isoelectric Point: 6.9173 |
| Chromosome | Chromosome/Scaffold: 03 Start: 20685757 End: 20689757 |
| Description | Putative glycosyl hydrolase of unknown function (DUF1680) |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GH127 | 166 | 450 | 4.8e-23 |
| IGAQMRYEITGDPLYKDIGAFFMDVVNSSHSYATGGTSVSEFWSDPKRLASTLQTENEESCTTYNMLKVSRHLFRWTKEMAYADYYERALTNGVLGIQRG TEPGVMIYMLPQYPGSSKAKSYHGWGTSYDSFWCCYGTGIESFSKLGDSIYFEEGEAPGLYIIQYISSSLDWKSGQIVLNQKVDPIVSSDPYLRVTLTFS PKKGTSQASTLYLRIPIWTNSEGATATINSQSLRLPAPGSFLSVNRKWRSSDKLTLQIPISLRTEAIKDDRHEYASVQAILYGPY | |||
| Full Sequence |
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| Protein Sequence Length: 684 Download |
| MWASTHNETL KKKMSAVVSA LSACQVKMGT GYLSAFPSEL FDRFEAIKPV WAPYYTIHKI 60 LAGLLDQYTL ADNAQALKMV KWMVDYFYNR VRNVITNYSV ERHYLSLNEE TGGMNDVLYK 120 LFSITGDPKH LVLAHLFDKP CFLGLLAVQA DDISGFHANT HIPVVIGAQM RYEITGDPLY 180 KDIGAFFMDV VNSSHSYATG GTSVSEFWSD PKRLASTLQT ENEESCTTYN MLKVSRHLFR 240 WTKEMAYADY YERALTNGVL GIQRGTEPGV MIYMLPQYPG SSKAKSYHGW GTSYDSFWCC 300 YGTGIESFSK LGDSIYFEEG EAPGLYIIQY ISSSLDWKSG QIVLNQKVDP IVSSDPYLRV 360 TLTFSPKKGT SQASTLYLRI PIWTNSEGAT ATINSQSLRL PAPGSFLSVN RKWRSSDKLT 420 LQIPISLRTE AIKDDRHEYA SVQAILYGPY LLAGHTSGDW NLKSGSGNSL SDSITPIPGS 480 YNGQLVSFSQ ESGISTFVLT NSNQSISMEK LPESGTDASL QATFRLVFKD SSSSKLSSVK 540 DVIGKSVMLE PFHLPGMLLV QQGKDRSFAL TNSADDDGSS IFRVVPGLDG KDGTVSLESG 600 IQNGCYVYSG VDYKSGQSMK LSCKSGTSSD TGFNQGASFV MNKGLSQYHP ISFVAKGDNR 660 NFLLAPLHSL RDESYTIYFN IQP* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3533 | COG3533 | 2.0e-59 | 1 | 459 | 464 | + Uncharacterized protein conserved in bacteria [Function unknown] | ||
| pfam07944 | DUF1680 | 7.0e-144 | 1 | 453 | 461 | + Putative glycosyl hydrolase of unknown function (DUF1680). The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function. One members of this family is annotated as a possible arabinosidase, but no references were found to back this. These proteins are related to a large family of glycosyl hydrolases. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI16424.1 | 0 | 1 | 682 | 49 | 732 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002283032.1 | 0 | 1 | 682 | 256 | 939 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002285548.1 | 0 | 1 | 682 | 181 | 863 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002297785.1 | 0 | 1 | 682 | 176 | 857 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002304762.1 | 0 | 1 | 683 | 176 | 858 | predicted protein [Populus trichocarpa] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| GO843439 | 347 | 124 | 469 | 0 |
| JG224039 | 311 | 217 | 525 | 0 |
| HO781092 | 415 | 253 | 665 | 0 |
| CU472339 | 253 | 67 | 319 | 0 |
| HO781092 | 21 | 662 | 682 | 1.8 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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