| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.003G206000.4 |
| Family | GH127 |
| Protein Properties | Length: 515 Molecular Weight: 56479.3 Isoelectric Point: 6.5174 |
| Chromosome | Chromosome/Scaffold: 03 Start: 20685757 End: 20689757 |
| Description | Putative glycosyl hydrolase of unknown function (DUF1680) |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GH127 | 12 | 281 | 8.1e-23 |
| KDIGAFFMDVVNSSHSYATGGTSVSEFWSDPKRLASTLQTENEESCTTYNMLKVSRHLFRWTKEMAYADYYERALTNGVLGIQRGTEPGVMIYMLPQYPG SSKAKSYHGWGTSYDSFWCCYGTGIESFSKLGDSIYFEEGEAPGLYIIQYISSSLDWKSGQIVLNQKVDPIVSSDPYLRVTLTFSPKKGTSQASTLYLRI PIWTNSEGATATINSQSLRLPAPGSFLSVNRKWRSSDKLTLQIPISLRTEAIKDDRHEYASVQAILYGPY | |||
| Full Sequence |
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| Protein Sequence Length: 515 Download |
| MRYEITGDPL YKDIGAFFMD VVNSSHSYAT GGTSVSEFWS DPKRLASTLQ TENEESCTTY 60 NMLKVSRHLF RWTKEMAYAD YYERALTNGV LGIQRGTEPG VMIYMLPQYP GSSKAKSYHG 120 WGTSYDSFWC CYGTGIESFS KLGDSIYFEE GEAPGLYIIQ YISSSLDWKS GQIVLNQKVD 180 PIVSSDPYLR VTLTFSPKKG TSQASTLYLR IPIWTNSEGA TATINSQSLR LPAPGSFLSV 240 NRKWRSSDKL TLQIPISLRT EAIKDDRHEY ASVQAILYGP YLLAGHTSGD WNLKSGSGNS 300 LSDSITPIPG SYNGQLVSFS QESGISTFVL TNSNQSISME KLPESGTDAS LQATFRLVFK 360 DSSSSKLSSV KDVIGKSVML EPFHLPGMLL VQQGKDRSFA LTNSADDDGS SIFRVVPGLD 420 GKDGTVSLES GIQNGCYVYS GVDYKSGQSM KLSCKSGTSS DTGFNQGASF VMNKGLSQYH 480 PISFVAKGDN RNFLLAPLHS LRDESYTIYF NIQP* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3533 | COG3533 | 1.0e-43 | 3 | 290 | 291 | + Uncharacterized protein conserved in bacteria [Function unknown] | ||
| pfam07944 | DUF1680 | 2.0e-82 | 2 | 284 | 287 | + Putative glycosyl hydrolase of unknown function (DUF1680). The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function. One members of this family is annotated as a possible arabinosidase, but no references were found to back this. These proteins are related to a large family of glycosyl hydrolases. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI16424.1 | 0 | 1 | 513 | 218 | 732 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002283032.1 | 0 | 1 | 513 | 425 | 939 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002285548.1 | 0 | 1 | 513 | 350 | 863 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002297785.1 | 0 | 1 | 513 | 345 | 857 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002304762.1 | 0 | 1 | 514 | 345 | 858 | predicted protein [Populus trichocarpa] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| JG224039 | 311 | 48 | 356 | 0 |
| HO781092 | 415 | 84 | 496 | 0 |
| JK989006 | 311 | 2 | 310 | 0 |
| GH271287 | 266 | 39 | 303 | 0 |
| HO781092 | 21 | 493 | 513 | 1.3 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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